4O9D

Structure of Dos1 propeller


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 4O9D

Classification: GENE REGULATION

Total Structure Weight: 95409.43

Macromolecule Entities
Molecule Chains Length Organism Details
Rik1-associated factor 1 A, B 428 Schizosaccharomyces pombe Fragment: Dos1WD
Gene Name(s): raf1 clr8 cmc1 dos1 SPCC613.12c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.213
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 121.15 α = 90.00
b = 102.79 β = 122.36
c = 95.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-02
  • Released Date: 2014-01-22
  • Deposition author(s): Kuscu, C., Schalch, T., Joshua-Tor, L.

Revision History

  • Version 1_0: 2014-01-22

    Type: Initial release

  • Version 1_1: 2014-02-26

    Type: Database references