4ANE

R80N MUTANT OF NUCLEOSIDE DIPHOSPHATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.184

Literature

Macromolecules
Sequence Display for 4ANE

Classification: TRANSFERASE

Total Structure Weight: 87452.64

Macromolecule Entities
Molecule Chains Length Organism Details
NUCLEOSIDE DIPHOSPHATE KINASE A, B, C..., D, E, FA, B, C, D, E, F 136 Mycobacterium tuberculosis EC#: 2.7.4.6 IUBMB
Mutation: R80N
Gene Name(s): ndkA ndk Rv2445c MTCY428.01 MTV008.01c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CIT
Query on CIT

A, D, F CITRIC ACID
C6 H8 O7
KRKNYBCHXYNGOX-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.184
  • Space Group: I 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 68.82 α = 90.00
b = 113.34 β = 106.40
c = 107.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-16
  • Released Date: 2013-03-13
  • Deposition author(s): Georgescauld, F., Moynie, L., Habersetzer, J., Lascu, I., Dautant, A.

Revision History

  • 2013-04-03
    Type: Database references
  • 2014-01-15
    Type: Database references
  • 2014-01-22
    Type: Database references