3NQ3

Bovine beta-lactoglobulin complex with capric acid


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.289
  • R-Value Work: 0.238

Literature

Macromolecules
Sequence Display for 3NQ3

Classification: TRANSPORT PROTEIN

Total Structure Weight: 18600.99

Macromolecule Entities
Molecule Chains Length Organism Details
Beta-lactoglobulin A 162 Bos taurus Gene Name(s): LGB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DKA
Query on DKA

A DECANOIC ACID
C10 H20 O2
GHVNFZFCNZKVNT-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
DKA N/A in BindingDB
Kd: 166000 nM  BindingMOAD
Kd: 167000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.289
  • R-Value Work: 0.238
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 53.50 α = 90.00
b = 53.50 β = 90.00
c = 112.14 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-06-29
  • Released Date: 2010-07-14
  • Deposition author(s): Loch, J., Lewinski, K.

Revision History

  • 2011-07-13
    Type: Version format compliance