1VHE

Crystal structure of a aminopeptidase/glucanase homolog


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.176

Literature

Macromolecules
Sequence Display for 1VHE

Classification: Structural genomics unknown function

Total Structure Weight: 41253.45

Macromolecule Entities
Molecule Chains Length Organism Details
aminopeptidase/glucanase homolog A 373 Bacillus subtilis Mutation: M10M, M31M, M64M, M75M, M98M, M138M, M160M, M170M, M256M, M269M, M330M
Gene Name(s): ysdC BSU28820
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.176
  • Space Group: F 4 3 2

Unit Cell:

Length (Å) Angle (°)
a = 223.97 α = 90.00
b = 223.97 β = 90.00
c = 223.97 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-12-01
  • Released Date: 2003-12-30
  • Deposition author(s): Structural GenomiX

Revision History

  • Version 1_0: 2003-12-30

    Type: Initial release

  • Version 1_1: 2008-04-26

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Derived calculations, Version format compliance