6BI6

Solution NMR structure of uncharacterized protein YejG


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 40 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with lowest energy and acceptable covalent geometry 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

The uncharacterized bacterial protein YejG has the same architecture as domain III of elongation factor G.

Mohanty, B.Hanson-Manful, P.Finn, T.J.Chambers, C.R.McKellar, J.L.O.Macindoe, I.Helder, S.Setiyaputra, S.Zhong, Y.Mackay, J.P.Patrick, W.M.

(2019) Proteins 87: 699-705

  • DOI: https://doi.org/10.1002/prot.25687
  • Primary Citation of Related Structures:  
    6BI6

  • PubMed Abstract: 

    InterPro family IPR020489 comprises ~1000 uncharacterized bacterial proteins. Previously we showed that overexpressing the Escherichia coli representative of this family, EcYejG, conferred low-level resistance to aminoglycoside antibiotics. In an attempt to shed light on the biochemical function of EcYejG, we have solved its structure using multinuclear solution NMR spectroscopy. The structure most closely resembles that of domain III from elongation factor G (EF-G). EF-G catalyzes ribosomal translocation and mutations in EF-G have also been associated with aminoglycoside resistance. While we were unable to demonstrate a direct interaction between EcYejG and the ribosome, the protein might play a role in translation.


  • Organizational Affiliation

    Faculty of Pharmacy and Pharmaceutical Sciences, Medicinal Chemistry, Monash Institute of Pharmaceutical Sciences, Monash University, Parkville, Australia.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Uncharacterized protein YejG115Escherichia coli K-12Mutation(s): 0 
Gene Names: yejGb2181JW2169
UniProt
Find proteins for P0AD21 (Escherichia coli (strain K12))
Explore P0AD21 
Go to UniProtKB:  P0AD21
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0AD21
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 40 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with lowest energy and acceptable covalent geometry 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2018-11-07
    Type: Initial release
  • Version 1.1: 2019-05-22
    Changes: Data collection, Database references
  • Version 1.2: 2019-07-17
    Changes: Data collection, Database references
  • Version 1.3: 2023-06-14
    Changes: Database references, Other