6BI6 | pdb_00006bi6

Solution NMR structure of uncharacterized protein YejG


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D [15N,1H]-HSQC600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 800
23D 15N-resolved [1H,1H]-NOESY600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 800
33D 13Cali-resolved [1H,1H]-NOESY600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 800
43D 13Caro-resolved [1H,1H]-NOESY600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 800
52D [13Cali,1H]-HSQC (multiplicity edited)600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 800
62D [13Caro,1H]-HSQC600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 800
72D 1H-1H NOESY600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 800
83D NUS HNCA600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 600
93D NUS HNCACB600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 600
103D NUS CBCA(CO)NH600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 600
113D NUS HN(CA)CO600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 600
123D NUS HNCO600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 600
133D NUS HBHA(CO)NH600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 600
143D NUS HNHA600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 600
153D NUS (H)CC(CO)NH600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 600
1615N{1H}-NOE600 uM [U-13C,15N] YejG, 20 mM Bi-tris, 50 mM NaCl, 1 mM TCEP, 0.2 mM PMSF90% H2O/10% D2O50 mM6.51 atm298Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
molecular dynamics simulation and energy refinementKoradi, R., Billeter, M. and Guntert, P. Point-centered domain decomposition for parallel molecular dynamics simulationOPALp
NMR Ensemble Information
Conformer Selection Criteriastructures with lowest energy and acceptable covalent geometry
Conformers Calculated Total Number40
Conformers Submitted Total Number15
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingTopSpinBruker Biospin
3chemical shift assignmentCARAKeller and Wuthrich
4peak pickingCARAKeller and Wuthrich
5structure calculationCYANAGuntert, Mumenthaler and Wuthrich
7refinementOPALpKoradi, Billeter and Guntert