Structural Fidelity and Neutralizing Antibody Binding Capacity of Hydrocarbon-Stapled HIV-1 Antigens
Bird, G.H., Irimia, A., Ofek, G., Kwong, P.D., Wilson, I.A., Walensky, L.D.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
10E8 Fab Heavy Chain | A [auth H], C [auth A] | 236 | Homo sapiens | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
10E8 Fab Light Chain | B [auth L], D [auth B] | 215 | Homo sapiens | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
SAH-MPER(662-683KKK)(B,q) | E [auth P], F [auth C] | 17 | Human immunodeficiency virus 1 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for I3VHW6 (Human immunodeficiency virus 1) Explore I3VHW6  Go to UniProtKB:  I3VHW6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | I3VHW6 | ||||
Sequence AnnotationsExpand | |||||
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Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MK8 Query on MK8 | E [auth P], F [auth C] | L-PEPTIDE LINKING | C7 H15 N O2 | LEU |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 68.562 | α = 90 |
b = 126.317 | β = 90 |
c = 129.875 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
PDB_EXTRACT | data extraction |
DENZO | data reduction |
SCALEPACK | data scaling |