2P62

Crystal structure of hypothetical protein PH0156 from Pyrococcus horikoshii OT3

• PDB DOI: https://doi.org/10.2210/pdb2P62/pdb

• Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
• Organism(s): Pyrococcus horikoshii OT3
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2007-03-16 Released: 2007-04-17 
• Deposition Author(s): Fu, Z.-Q., Chen, L., Zhu, J., Swindell, J.T., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Chrzas, J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 0.244 
• R-Value Work: 0.213 

Literature

Crystal structure of hypothetical protein PH0156 from Pyrococcus horikoshii OT3

Fu, Z.-Q., Chen, L., Zhu, J., Swindell, J.T., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Chrzas, J., Rose, J.P., Wang, B.-C.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 55.26 kDa 
• Atom Count: 4,019 
• Modelled Residue Count: 482 
• Deposited Residue Count: 482 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hypothetical protein PH0156	A, B	241	Pyrococcus horikoshii OT3	Mutation(s): 0  Gene Names: PH0156
UniProt
Find proteins for O57895 (Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)) Explore O57895  Go to UniProtKB:  O57895

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 0.244 
• R-Value Work: 0.213 
• Space Group: P 6₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 122.071	α = 90
b = 122.071	β = 90
c = 109.067	γ = 120

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
CNS	refinement
PDB_EXTRACT	data extraction
SERGUI	data collection
HKL-2000	data reduction
SGXPRO	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-04-17 
Deposition Author(s): Fu, Z.-Q., Chen, L., Zhu, J., Swindell, J.T., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Chrzas, J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2007-04-17
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Source and taxonomy, Version format compliance
• Version 1.3: 2017-10-18
  Changes: Refinement description
• Version 1.4: 2018-01-24
  Changes: Database references, Structure summary