GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 9D8B designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 9D8B_GDP_A_301 | 97% | 41% | 0.056 | 0.979 | 0.95 | 1.25 | - | 4 | 0 | 0 | 100% | 1 |
| 9D8B_GDP_B_301 | 93% | 39% | 0.066 | 0.966 | 1.06 | 1.2 | 3 | 2 | 0 | 0 | 100% | 1 |
| 9D8B_GDP_C_301 | 92% | 43% | 0.065 | 0.961 | 0.87 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |
| 9D8B_GDP_D_301 | 88% | 38% | 0.075 | 0.956 | 1.02 | 1.31 | 1 | 5 | 0 | 0 | 100% | 1 |
| 9BA7_GDP_A_301 | 88% | 49% | 0.063 | 0.941 | 0.94 | 0.93 | - | 1 | 0 | 0 | 100% | 1 |
| 8VWN_GDP_A_301 | 76% | 38% | 0.063 | 0.898 | 1.03 | 1.27 | 3 | 4 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
