GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6X5S designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6X5S_GDP_D_600 | 93% | 27% | 0.072 | 0.972 | 1.04 | 1.76 | 1 | 12 | 0 | 0 | 100% | 1 |
| 6X5S_GDP_C_600 | 85% | 24% | 0.089 | 0.959 | 1.21 | 1.76 | 3 | 11 | 0 | 0 | 100% | 1 |
| 6X5T_GDP_D_600 | 100% | 28% | 0.022 | 0.997 | 1.1 | 1.65 | 1 | 10 | 0 | 0 | 100% | 1 |
| 6X5U_GDP_A_600 | 100% | 28% | 0.025 | 0.997 | 1.1 | 1.65 | 1 | 9 | 1 | 0 | 100% | 1 |
| 6X5H_GDP_A_601 | 99% | 38% | 0.039 | 0.989 | 0.78 | 1.51 | 1 | 7 | 0 | 0 | 100% | 1 |
| 6VLG_GDP_B_601 | 99% | 26% | 0.042 | 0.989 | 1.19 | 1.71 | 3 | 7 | 0 | 0 | 100% | 1 |
| 6X5R_GDP_C_600 | 99% | 25% | 0.048 | 0.988 | 1.19 | 1.76 | 2 | 8 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
