6OM8 | pdb_00006om8


UDX: URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE

UDX is a Ligand Of Interest in 6OM8 designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6OM8_UDX_J_501 76% 36% 0.133 0.9760.97 1.42 3 600100%1
6OM8_UDX_G_501 75% 36% 0.138 0.9790.94 1.46 2 800100%1
6OM8_UDX_L_501 74% 37% 0.146 0.9830.98 1.36 3 500100%1
6OM8_UDX_H_501 74% 38% 0.146 0.9820.95 1.36 2 500100%1
6OM8_UDX_D_501 73% 34% 0.152 0.9861 1.48 3 610100%1
6OM8_UDX_F_500 72% 36% 0.149 0.9780.99 1.4 4 510100%1
6OM8_UDX_C_500 72% 36% 0.151 0.980.98 1.43 2 510100%1
6OM8_UDX_C_501 71% 37% 0.157 0.9860.97 1.37 2 600100%1
6OM8_UDX_E_501 71% 36% 0.152 0.980.97 1.42 2 500100%1
6OM8_UDX_K_501 71% 38% 0.157 0.9830.95 1.38 2 700100%1
6OM8_UDX_I_500 69% 36% 0.145 0.9660.99 1.43 2 610100%1
6OM8_UDX_D_500 69% 37% 0.162 0.9830.96 1.4 2 710100%1
6OM8_UDX_F_501 69% 34% 0.164 0.9850.96 1.52 2 700100%1
6OM8_UDX_A_501 69% 36% 0.164 0.9850.94 1.45 2 700100%1
6OM8_UDX_A_500 69% 37% 0.161 0.980.94 1.43 1 600100%1
6OM8_UDX_G_500 68% 37% 0.156 0.9720.98 1.36 2 610100%1
6OM8_UDX_H_500 67% 37% 0.168 0.9820.98 1.4 2 500100%1
6OM8_UDX_K_500 66% 36% 0.16 0.9720.95 1.44 2 600100%1
6OM8_UDX_I_501 64% 37% 0.171 0.9770.93 1.44 3 600100%1
6OM8_UDX_B_500 64% 36% 0.169 0.9730.96 1.46 2 700100%1
6OM8_UDX_B_501 64% 36% 0.176 0.980.98 1.41 2 500100%1
6OM8_UDX_E_500 56% 36% 0.191 0.970.95 1.45 2 710100%1
6OM8_UDX_L_500 54% 35% 0.198 0.9680.95 1.49 3 600100%1
6OM8_UDX_J_500 37% 38% 0.207 0.9120.99 1.33 3 510100%1
8AVQ_UDX_A_304 92% 71% 0.081 0.9790.37 0.59 - -00100%1
5VR8_UDX_B_502 91% 35% 0.091 0.9870.98 1.45 1 700100%1
9AR1_UDX_A_406 90% 65% 0.072 0.9610.47 0.7 - -30100%1
3PTZ_UDX_A_501 87% 20% 0.109 0.991.2 2.02 4 1300100%1
6C58_UDX_A_501 82% 52% 0.109 0.9720.72 1.01 - 300100%1