GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6N0B designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6N0B_GDP_B_401 | 93% | 47% | 0.084 | 0.989 | 0.83 | 1.12 | - | 3 | 0 | 0 | 100% | 1 |
| 6N0B_GDP_D_401 | 92% | 52% | 0.086 | 0.984 | 0.76 | 0.96 | - | 2 | 0 | 0 | 100% | 1 |
| 6N0B_GDP_A_401 | 91% | 47% | 0.085 | 0.98 | 0.79 | 1.14 | - | 4 | 0 | 0 | 100% | 1 |
| 6N0B_GDP_C_401 | 91% | 46% | 0.091 | 0.985 | 0.83 | 1.16 | - | 2 | 0 | 0 | 100% | 1 |
| 6N12_GDP_B_401 | 82% | 42% | 0.12 | 0.984 | 0.97 | 1.16 | - | 5 | 0 | 0 | 100% | 1 |
| 3TW4_GDP_A_500 | 51% | 40% | 0.195 | 0.954 | 0.94 | 1.3 | 1 | 4 | 9 | 0 | 100% | 1 |
| 2QAG_GDP_A_362 | 31% | 42% | 0.208 | 0.883 | 1 | 1.15 | 1 | 3 | 14 | 0 | 100% | 1 |
| 3T5D_GDP_C_1 | 30% | 41% | 0.249 | 0.921 | 0.93 | 1.25 | 1 | 4 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
