NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5YQ5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5YQ5_NAG_A_504 | 69% | 42% | 0.112 | 0.927 | 0.62 | 1.61 | - | 4 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_A_503 | 67% | 48% | 0.116 | 0.925 | 0.61 | 1.38 | - | 2 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_D_502 | 60% | 32% | 0.149 | 0.933 | 0.71 | 1.96 | - | 2 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_C_503 | 58% | 28% | 0.102 | 0.88 | 0.77 | 2.07 | - | 5 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_C_502 | 55% | 41% | 0.14 | 0.908 | 0.67 | 1.6 | - | 3 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_B_501 | 48% | 39% | 0.141 | 0.885 | 0.71 | 1.66 | - | 3 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_B_502 | 45% | 21% | 0.165 | 0.895 | 1.05 | 2.2 | 1 | 5 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_D_503 | 38% | 35% | 0.168 | 0.868 | 0.63 | 1.91 | - | 3 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_A_502 | 37% | 32% | 0.177 | 0.873 | 0.67 | 1.99 | - | 3 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_D_501 | 17% | 20% | 0.194 | 0.77 | 1 | 2.37 | 1 | 6 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_A_501 | 12% | 44% | 0.189 | 0.719 | 0.57 | 1.55 | - | 4 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_B_503 | 11% | 27% | 0.201 | 0.72 | 0.87 | 2.02 | - | 4 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_C_501 | 11% | 38% | 0.265 | 0.786 | 0.75 | 1.66 | - | 4 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |