GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5T02 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5T02_GDP_A_200 | 88% | 44% | 0.108 | 0.984 | 1.11 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
| 5T02_GDP_C_200 | 85% | 47% | 0.118 | 0.984 | 0.92 | 1.12 | 1 | 2 | 1 | 0 | 100% | 1 |
| 5T02_GDP_B_201 | 85% | 46% | 0.117 | 0.982 | 0.91 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 5T02_GDP_E_200 | 81% | 45% | 0.131 | 0.984 | 0.93 | 1.22 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5T02_GDP_D_200 | 80% | 47% | 0.129 | 0.979 | 0.89 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 5T02_GDP_F_200 | 75% | 47% | 0.142 | 0.975 | 0.94 | 1.12 | 1 | 4 | 0 | 0 | 100% | 1 |
| 4IEN_GDP_A_202 | 99% | 21% | 0.059 | 0.988 | 1.24 | 2.23 | 3 | 9 | 0 | 0 | 100% | 1 |
| 5SZY_GDP_D_200 | 94% | 52% | 0.079 | 0.979 | 0.87 | 0.98 | - | 3 | 0 | 0 | 100% | 1 |
| 5V3A_GDP_A_202 | 92% | 4% | 0.086 | 0.977 | 4.03 | 1.91 | 13 | 7 | 0 | 0 | 100% | 1 |
| 5SZZ_GDP_B_202 | 92% | 39% | 0.085 | 0.975 | 1.01 | 1.43 | 1 | 5 | 2 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 19% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
| 5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
| 2PHN_GDP_A_2696 | 100% | 45% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
