5NQD | pdb_00005nqd


MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE

MGD is a Ligand Of Interest in 5NQD designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5NQD_MGD_A_2001 99% 21% 0.037 0.9891.51 1.66 8 1300100%1
5NQD_MGD_G_2001 99% 19% 0.038 0.9871.42 1.89 7 1520100%1
5NQD_MGD_A_2002 99% 15% 0.04 0.9871.75 1.88 7 1510100%1
5NQD_MGD_G_2002 99% 15% 0.041 0.9861.92 1.78 11 1300100%1
5NQD_MGD_C_2001 99% 16% 0.041 0.9861.53 2.01 9 1500100%1
5NQD_MGD_C_2002 99% 15% 0.042 0.9861.72 1.94 10 1710100%1
5NQD_MGD_E_2001 99% 16% 0.042 0.9841.62 1.94 7 1210100%1
5NQD_MGD_E_2002 99% 17% 0.044 0.9851.47 2.03 8 18 00100%1
8R3A_MGD_A_912 100% 43% 0.026 0.9940.92 1.18 2 420100%1
8CCQ_MGD_A_2002 100% 19% 0.029 0.9931.6 1.77 7 1210100%1
8ED4_MGD_E_2002 98% 51% 0.05 0.9820.59 1.17 - 500100%1
4AAY_MGD_C_2002 94% 17% 0.071 0.9791.53 1.96 8 1410100%1
8CM5_MGD_A_1105 100% 47% 0.017 0.9980.77 1.14 1 610100%1
5E7O_MGD_G_1003 100% 1% 0.021 0.9975.18 1.97 30 19 30100%1
3ML1_MGD_A_1804 100% 21% 0.027 0.9941.34 1.86 8 1720100%1
7Z5O_MGD_AAA_1101 100% 55% 0.027 0.9940.64 0.96 - 310100%1
3O5A_MGD_A_1804 100% 17% 0.027 0.9931.31 2.19 4 1720100%1