5NQD
Arsenite oxidase AioAB from Rhizobium sp. str. NT-26 mutant AioBF108A
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F | d5nqdf_ | All beta proteins | ISP domain | ISP domain | automated matches | automated matches | (Pseudorhizobium banfieldiae ) [TaxId: 1125847 ], | SCOPe (2.08) |
H | d5nqdh_ | All beta proteins | ISP domain | ISP domain | automated matches | automated matches | (Pseudorhizobium banfieldiae ) [TaxId: 1125847 ], | SCOPe (2.08) |
B | d5nqdb_ | All beta proteins | ISP domain | ISP domain | automated matches | automated matches | (Pseudorhizobium banfieldiae ) [TaxId: 1125847 ], | SCOPe (2.08) |
D | d5nqdd_ | All beta proteins | ISP domain | ISP domain | automated matches | automated matches | (Pseudorhizobium banfieldiae ) [TaxId: 1125847 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Formate dehydrogenase/DMSO reductase domains 1-3 | 8099846 | 3001453 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | ADC-like | 8101088 | 3001132 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Formate dehydrogenase/DMSO reductase domains 1-3 | 8099846 | 3001453 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ADC-like | 8101088 | 3001132 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | ADC-like | 8101088 | 3001132 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Formate dehydrogenase/DMSO reductase domains 1-3 | 8099846 | 3001453 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | ADC-like | 8101088 | 3001132 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Formate dehydrogenase/DMSO reductase domains 1-3 | 8099846 | 3001453 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | ISP domain | 8086780 | 3000233 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | ISP domain | 8086780 | 3000233 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Rieske iron-sulfur protein (ISP) | 8086779 | 4001667 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | ISP domain | 8086780 | 3000233 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | ISP domain | 8086780 | 3000233 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01568 | e5nqdA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: PF01568 | ECOD (1.6) |
A | PF18465 | e5nqdA4 | A: a+b two layers | X: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domain 1 | F: PF18465 | ECOD (1.6) |
A | PF00384 | e5nqdA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domains 2 and 3 | F: PF00384 | ECOD (1.6) |
C | PF01568 | e5nqdC3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: PF01568 | ECOD (1.6) |
C | PF18465 | e5nqdC2 | A: a+b two layers | X: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domain 1 | F: PF18465 | ECOD (1.6) |
C | PF00384 | e5nqdC4 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domains 2 and 3 | F: PF00384 | ECOD (1.6) |
E | PF01568 | e5nqdE3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: PF01568 | ECOD (1.6) |
E | PF18465 | e5nqdE1 | A: a+b two layers | X: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domain 1 | F: PF18465 | ECOD (1.6) |
E | PF00384 | e5nqdE2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domains 2 and 3 | F: PF00384 | ECOD (1.6) |
G | PF01568 | e5nqdG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: PF01568 | ECOD (1.6) |
G | PF18465 | e5nqdG3 | A: a+b two layers | X: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domain 1 | F: PF18465 | ECOD (1.6) |
G | PF00384 | e5nqdG4 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domains 2 and 3 | F: PF00384 | ECOD (1.6) |
F | F_UNCLASSIFIED | e5nqdF2 | A: beta sandwiches | X: ISP domain (From Topology) | H: ISP domain (From Topology) | T: ISP domain | F: F_UNCLASSIFIED | ECOD (1.6) |
F | PF00355 | e5nqdF1 | A: few secondary structure elements | X: Trm112p-like (From Topology) | H: Trm112p-like (From Topology) | T: Trm112p-like | F: PF00355 | ECOD (1.6) |
H | F_UNCLASSIFIED | e5nqdH1 | A: beta sandwiches | X: ISP domain (From Topology) | H: ISP domain (From Topology) | T: ISP domain | F: F_UNCLASSIFIED | ECOD (1.6) |
H | PF00355 | e5nqdH2 | A: few secondary structure elements | X: Trm112p-like (From Topology) | H: Trm112p-like (From Topology) | T: Trm112p-like | F: PF00355 | ECOD (1.6) |
B | F_UNCLASSIFIED | e5nqdB2 | A: beta sandwiches | X: ISP domain (From Topology) | H: ISP domain (From Topology) | T: ISP domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF00355 | e5nqdB1 | A: few secondary structure elements | X: Trm112p-like (From Topology) | H: Trm112p-like (From Topology) | T: Trm112p-like | F: PF00355 | ECOD (1.6) |
D | F_UNCLASSIFIED | e5nqdD1 | A: beta sandwiches | X: ISP domain (From Topology) | H: ISP domain (From Topology) | T: ISP domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF00355 | e5nqdD2 | A: few secondary structure elements | X: Trm112p-like (From Topology) | H: Trm112p-like (From Topology) | T: Trm112p-like | F: PF00355 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01568 | Molydopterin dinucleotide binding domain (Molydop_binding) | Molydopterin dinucleotide binding domain | This domain is found in various molybdopterin - containing oxidoreductases and tungsten formylmethanofuran dehydrogenase subunit d (FwdD) and molybdenum formylmethanofuran dehydrogenase subunit (FmdD); where the domain constitutes almost the entir ... | Domain | |
PF18465 | Rieske 3Fe-4S (Rieske_3) | Rieske 3Fe-4S | This domain is comprised of the iron-sulphur cluster and Rieske subunit found in the large subunit of arsenite oxidase. Arsenite oxidase is a 100 kDa molybdenum- and iron-sulfur-containing protein located on the outer surface of the inner membrane of ... | Domain | |
PF00384 | Molybdopterin oxidoreductase (Molybdopterin) | Molybdopterin oxidoreductase | - | Family | |
PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
AroA | ||||
Arsenite oxidase small subunit AioB Rieske [2Fe-2S] cluster | - | - |