5EKP | pdb_00005ekp


UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 5EKP designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5EKP_UDP_C_401 76% 31% 0.074 0.911 1.64 - 600100%1
5EKP_UDP_D_401 74% 31% 0.081 0.9131 1.62 1 610100%1
5EKP_UDP_A_401 66% 32% 0.087 0.8920.99 1.59 - 610100%1
5EKP_UDP_B_401 60% 31% 0.086 0.8671 1.61 1 620100%1
5EKE_UDP_A_401 71% 32% 0.088 0.9090.99 1.6 - 610100%1
5F87_UDP_A_501 100% 29% 0.013 0.9991.18 1.54 2 420100%1
5V0T_UDP_B_501 100% 69% 0.014 0.9990.43 0.61 - 100100%1
7FGA_UDP_D_401 100% 2% 0.014 0.9993.6 2.79 15 1220100%1
8X3Q_UDP_D_401 100% 3% 0.013 0.9993.5 2.77 14 1400100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.51 2.73 14 1220100%1