PEB: PHYCOERYTHROBILIN
PEB is a Ligand Of Interest in 5AQD designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5AQD_PEB_M_188 | 91% | 7% | 0.059 | 0.953 | 2.66 | 2.09 | 13 | 20 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_H_167 | 90% | 7% | 0.06 | 0.947 | 2.59 | 2.07 | 13 | 18 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_E_167 | 89% | 8% | 0.063 | 0.946 | 2.66 | 1.97 | 13 | 18 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_G_167 | 89% | 7% | 0.063 | 0.946 | 2.68 | 2 | 13 | 15 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_L_166 | 87% | 6% | 0.065 | 0.943 | 2.64 | 2.39 | 12 | 23 | 3 | 0 | 100% | 1 |
| 5AQD_PEB_M_187 | 87% | 7% | 0.065 | 0.943 | 2.56 | 2.15 | 10 | 15 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_X_186 | 87% | 7% | 0.068 | 0.946 | 2.63 | 2.21 | 11 | 21 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_S_187 | 87% | 7% | 0.066 | 0.942 | 2.63 | 2.1 | 13 | 17 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_U_188 | 87% | 8% | 0.066 | 0.941 | 2.66 | 1.95 | 13 | 20 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_J_166 | 86% | 6% | 0.068 | 0.942 | 2.69 | 2.39 | 12 | 22 | 4 | 0 | 100% | 1 |
| 5AQD_PEB_B_166 | 86% | 5% | 0.068 | 0.94 | 2.67 | 2.46 | 12 | 23 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_P_188 | 86% | 7% | 0.068 | 0.939 | 2.65 | 2.01 | 12 | 21 | 3 | 0 | 100% | 1 |
| 5AQD_PEB_D_166 | 86% | 6% | 0.069 | 0.94 | 2.69 | 2.38 | 13 | 24 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_S_188 | 85% | 7% | 0.068 | 0.938 | 2.71 | 2.04 | 13 | 17 | 4 | 0 | 100% | 1 |
| 5AQD_PEB_A_166 | 85% | 5% | 0.068 | 0.938 | 2.71 | 2.49 | 11 | 26 | 4 | 0 | 100% | 1 |
| 5AQD_PEB_Q_188 | 85% | 7% | 0.07 | 0.94 | 2.65 | 2.11 | 11 | 18 | 3 | 0 | 100% | 1 |
| 5AQD_PEB_M_186 | 85% | 7% | 0.071 | 0.941 | 2.65 | 2.1 | 10 | 19 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_F_167 | 85% | 7% | 0.068 | 0.936 | 2.72 | 2 | 13 | 17 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_G_166 | 85% | 6% | 0.068 | 0.936 | 2.54 | 2.44 | 12 | 22 | 5 | 0 | 100% | 1 |
| 5AQD_PEB_V_187 | 85% | 7% | 0.068 | 0.936 | 2.65 | 2.09 | 12 | 22 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_W_186 | 85% | 7% | 0.069 | 0.937 | 2.64 | 2.14 | 10 | 21 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_N_187 | 84% | 7% | 0.069 | 0.936 | 2.68 | 1.99 | 13 | 17 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_F_166 | 84% | 5% | 0.069 | 0.935 | 2.61 | 2.67 | 12 | 24 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_X_188 | 84% | 7% | 0.071 | 0.937 | 2.65 | 2.05 | 11 | 21 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_W_188 | 84% | 7% | 0.069 | 0.934 | 2.7 | 1.99 | 11 | 18 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_K_166 | 83% | 5% | 0.07 | 0.933 | 2.67 | 2.43 | 13 | 22 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_V_188 | 83% | 7% | 0.071 | 0.934 | 2.71 | 2.01 | 14 | 19 | 3 | 0 | 100% | 1 |
| 5AQD_PEB_A_167 | 83% | 8% | 0.072 | 0.934 | 2.59 | 2 | 11 | 16 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_O_187 | 82% | 7% | 0.073 | 0.932 | 2.67 | 2 | 12 | 16 | 3 | 0 | 100% | 1 |
| 5AQD_PEB_X_187 | 82% | 7% | 0.074 | 0.933 | 2.61 | 2.14 | 13 | 16 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_C_166 | 81% | 5% | 0.073 | 0.929 | 2.63 | 2.48 | 12 | 25 | 5 | 0 | 100% | 1 |
| 5AQD_PEB_H_166 | 81% | 6% | 0.075 | 0.93 | 2.69 | 2.31 | 13 | 23 | 4 | 0 | 100% | 1 |
| 5AQD_PEB_P_187 | 81% | 8% | 0.074 | 0.928 | 2.67 | 1.94 | 11 | 18 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_B_167 | 81% | 7% | 0.076 | 0.93 | 2.65 | 2.05 | 12 | 19 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_N_188 | 80% | 6% | 0.073 | 0.925 | 2.72 | 2.21 | 12 | 18 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_C_167 | 80% | 7% | 0.076 | 0.928 | 2.67 | 2.03 | 13 | 17 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_E_166 | 80% | 6% | 0.077 | 0.929 | 2.68 | 2.29 | 12 | 21 | 4 | 0 | 100% | 1 |
| 5AQD_PEB_O_188 | 80% | 7% | 0.079 | 0.93 | 2.65 | 2.12 | 14 | 20 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_J_167 | 79% | 8% | 0.078 | 0.928 | 2.61 | 2.03 | 12 | 18 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_W_187 | 79% | 7% | 0.078 | 0.928 | 2.63 | 2.1 | 12 | 19 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_O_186 | 79% | 6% | 0.076 | 0.925 | 2.66 | 2.28 | 12 | 18 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_N_186 | 79% | 7% | 0.077 | 0.925 | 2.69 | 2.13 | 12 | 19 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_V_186 | 79% | 5% | 0.077 | 0.925 | 2.66 | 2.43 | 12 | 18 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_R_187 | 79% | 7% | 0.078 | 0.926 | 2.64 | 2.08 | 13 | 19 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_U_187 | 79% | 7% | 0.077 | 0.924 | 2.66 | 2.11 | 9 | 21 | 2 | 0 | 100% | 1 |
| 5AQD_PEB_Q_187 | 78% | 7% | 0.08 | 0.925 | 2.75 | 1.92 | 13 | 19 | 5 | 0 | 100% | 1 |
| 5AQD_PEB_R_186 | 78% | 7% | 0.08 | 0.925 | 2.72 | 2.08 | 12 | 19 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_R_188 | 78% | 7% | 0.076 | 0.919 | 2.69 | 2.02 | 12 | 19 | 3 | 0 | 100% | 1 |
| 5AQD_PEB_U_186 | 77% | 6% | 0.08 | 0.923 | 2.7 | 2.29 | 13 | 17 | 4 | 0 | 100% | 1 |
| 5AQD_PEB_Q_186 | 77% | 6% | 0.076 | 0.918 | 2.68 | 2.19 | 11 | 18 | 3 | 0 | 100% | 1 |
| 5AQD_PEB_L_167 | 77% | 8% | 0.082 | 0.924 | 2.53 | 2.1 | 10 | 17 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_I_166 | 77% | 5% | 0.075 | 0.915 | 2.73 | 2.36 | 13 | 22 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_P_186 | 75% | 7% | 0.085 | 0.92 | 2.61 | 2.2 | 10 | 20 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_S_186 | 75% | 6% | 0.084 | 0.918 | 2.73 | 2.15 | 12 | 18 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_T_187 | 74% | 7% | 0.084 | 0.916 | 2.64 | 2.07 | 11 | 18 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_T_186 | 72% | 6% | 0.082 | 0.906 | 2.64 | 2.37 | 11 | 19 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_T_188 | 67% | 7% | 0.088 | 0.897 | 2.72 | 2.03 | 13 | 20 | 5 | 0 | 100% | 1 |
| 5AQD_PEB_D_167 | 67% | 7% | 0.09 | 0.899 | 2.58 | 2.24 | 12 | 19 | 0 | 0 | 100% | 1 |
| 5AQD_PEB_I_167 | 67% | 7% | 0.089 | 0.897 | 2.62 | 2.17 | 13 | 21 | 1 | 0 | 100% | 1 |
| 5AQD_PEB_K_167 | 66% | 8% | 0.091 | 0.896 | 2.64 | 2.01 | 14 | 18 | 1 | 0 | 100% | 1 |
| 5NB4_PEB_V_188 | 99% | 20% | 0.042 | 0.982 | 1.9 | 1.4 | 11 | 7 | 1 | 0 | 100% | 1 |
| 5NB3_PEB_A_166 | 98% | 13% | 0.041 | 0.975 | 2.08 | 1.81 | 12 | 14 | 0 | 0 | 100% | 1 |
| 5FVB_PEB_L_202 | 93% | 7% | 0.059 | 0.958 | 2.57 | 2.08 | 9 | 19 | 1 | 0 | 100% | 1 |
| 7F86_PEB_N_301 | 87% | 50% | 0.069 | 0.944 | 1 | 0.84 | 1 | 2 | 2 | 0 | 100% | 1 |
| 3V57_PEB_B_205 | 100% | 5% | 0.022 | 0.993 | 2.65 | 2.46 | 12 | 21 | 0 | 0 | 100% | 1 |
| 2BV8_PEB_B_1175 | 99% | 3% | 0.038 | 0.989 | 3.12 | 2.87 | 23 | 20 | 0 | 1 | 100% | 1 |
| 8B4N_PEB_DDD_203 | 99% | 51% | 0.039 | 0.987 | 0.98 | 0.81 | 2 | 1 | 4 | 0 | 100% | 1 |
| 6OZB_PEB_A_900 | 96% | 7% | 0.052 | 0.972 | 2.97 | 1.78 | 17 | 15 | 4 | 0 | 100% | 1 |














