Ligand validation:4Y28

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4Y28 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4Y28_CLA_B_1235	82%	6%	0.094	0.955	2.36	2.53	21	24	10	1	100%	1
4Y28_CLA_B_1229	80%	6%	0.107	0.963	2.36	2.49	23	26	6	1	100%	1
4Y28_CLA_B_1203	78%	7%	0.111	0.958	2.33	2.48	23	24	2	1	100%	1
4Y28_CLA_A_1138	77%	7%	0.112	0.957	2.39	2.38	22	25	8	1	100%	1
4Y28_CLA_A_1013	76%	7%	0.115	0.955	2.35	2.46	23	25	8	1	100%	1
4Y28_CLA_A_1140	75%	7%	0.116	0.953	2.39	2.42	22	25	5	1	100%	1
4Y28_CLA_B_1230	74%	5%	0.098	0.95	2.46	2.72	19	24	8	1	89%	1
4Y28_CLA_A_1103	73%	6%	0.122	0.953	2.34	2.49	22	26	5	1	100%	1
4Y28_CLA_A_1128	73%	7%	0.115	0.945	2.35	2.36	21	25	12	1	100%	1
4Y28_CLA_B_1023	70%	7%	0.121	0.942	2.36	2.45	22	26	8	1	100%	1
4Y28_CLA_B_1206	70%	7%	0.125	0.945	2.37	2.45	21	26	5	1	100%	1
4Y28_CLA_A_1107	69%	6%	0.126	0.944	2.38	2.47	23	25	2	1	100%	1
4Y28_CLA_B_1210	69%	7%	0.138	0.956	2.35	2.46	22	26	9	1	100%	1
4Y28_CLA_A_1101	68%	6%	0.121	0.935	2.35	2.52	22	23	4	1	100%	1
4Y28_CLA_B_1225	68%	7%	0.137	0.951	2.38	2.4	21	23	4	1	100%	1
4Y28_CLA_A_1104	68%	6%	0.126	0.939	2.37	2.49	23	25	4	1	100%	1
4Y28_CLA_F_1302	67%	4%	0.093	0.943	2.61	2.78	20	23	19	1	77%	1
4Y28_CLA_A_1125	66%	6%	0.124	0.947	2.42	2.56	22	26	5	1	92%	1
4Y28_CLA_B_1202	66%	6%	0.143	0.951	2.35	2.53	22	25	9	1	100%	1
4Y28_CLA_4_4009	66%	5%	0.111	0.959	2.5	2.77	19	24	14	1	77%	1
4Y28_CLA_A_1109	66%	7%	0.125	0.931	2.37	2.45	21	25	7	1	100%	1
4Y28_CLA_A_1119	65%	7%	0.136	0.942	2.36	2.42	22	24	7	1	100%	1
4Y28_CLA_A_1106	65%	6%	0.133	0.938	2.37	2.49	22	24	15	1	100%	1
4Y28_CLA_A_1132	65%	6%	0.14	0.945	2.37	2.48	22	27	9	1	100%	1
4Y28_CLA_B_1205	65%	7%	0.149	0.954	2.35	2.38	21	25	10	1	100%	1
4Y28_CLA_A_1136	64%	5%	0.115	0.942	2.54	2.65	22	27	7	1	86%	1
4Y28_CLA_B_1227	64%	6%	0.13	0.932	2.37	2.48	23	26	9	1	100%	1
4Y28_CLA_B_1215	64%	6%	0.133	0.949	2.48	2.52	23	23	9	1	92%	1
4Y28_CLA_B_1223	64%	6%	0.135	0.936	2.34	2.5	22	27	5	0	100%	1
4Y28_CLA_B_1211	63%	6%	0.134	0.933	2.35	2.54	21	29	9	1	100%	1
4Y28_CLA_B_1221	63%	6%	0.143	0.942	2.37	2.51	22	27	12	1	100%	1
4Y28_CLA_4_4003	63%	7%	0.132	0.93	2.26	2.49	20	25	23	1	100%	1
4Y28_CLA_B_1240	63%	6%	0.124	0.92	2.36	2.49	22	27	8	1	100%	1
4Y28_CLA_4_4005	63%	6%	0.128	0.938	2.3	2.7	19	30	14	1	92%	1
4Y28_CLA_A_1102	62%	5%	0.109	0.945	2.66	2.7	22	23	4	1	77%	1
4Y28_CLA_A_1111	62%	6%	0.13	0.939	2.45	2.53	22	26	8	1	92%	1
4Y28_CLA_1_1012	62%	5%	0.107	0.942	2.56	2.75	20	26	17	1	77%	1
4Y28_CLA_B_1216	62%	7%	0.14	0.934	2.37	2.43	23	25	5	1	100%	1
4Y28_CLA_B_1226	62%	7%	0.142	0.936	2.34	2.39	21	24	9	1	100%	1
4Y28_CLA_1_1004	62%	7%	0.137	0.93	2.24	2.55	19	24	31	1	100%	1
4Y28_CLA_B_1239	62%	7%	0.139	0.932	2.37	2.45	23	25	6	1	100%	1
4Y28_CLA_4_4012	61%	7%	0.142	0.935	2.22	2.54	19	30	26	1	100%	1
4Y28_CLA_A_1122	61%	7%	0.147	0.939	2.37	2.42	22	24	11	1	100%	1
4Y28_CLA_A_1237	60%	5%	0.136	0.939	2.45	2.65	21	25	5	1	92%	1
4Y28_CLA_A_1117	60%	7%	0.162	0.951	2.37	2.42	22	24	5	1	100%	1
4Y28_CLA_B_1231	60%	6%	0.119	0.918	2.49	2.49	22	25	4	1	92%	1
4Y28_CLA_B_1224	60%	6%	0.15	0.937	2.35	2.49	21	26	8	1	100%	1
4Y28_CLA_A_1127	59%	7%	0.152	0.938	2.37	2.4	22	23	6	1	100%	1
4Y28_CLA_L_1502	59%	6%	0.134	0.931	2.36	2.64	19	27	14	1	92%	1
4Y28_CLA_2_2003	59%	5%	0.12	0.93	2.38	2.84	19	24	34	1	85%	1
4Y28_CLA_2_2004	59%	6%	0.14	0.923	2.39	2.47	18	27	31	1	100%	1
4Y28_CLA_A_1139	59%	7%	0.137	0.919	2.37	2.45	23	26	5	1	100%	1
4Y28_CLA_A_1129	58%	4%	0.11	0.932	2.68	2.76	22	25	0	1	77%	1
4Y28_CLA_B_1207	58%	6%	0.144	0.926	2.36	2.48	22	25	15	0	100%	1
4Y28_CLA_4_4004	58%	6%	0.14	0.935	2.34	2.61	18	27	20	1	92%	1
4Y28_CLA_1_1003	57%	5%	0.137	0.943	2.42	2.72	21	28	36	1	85%	1
4Y28_CLA_2_2008	57%	4%	0.129	0.948	2.48	3.11	19	32	20	1	77%	1
4Y28_CLA_A_1116	57%	5%	0.145	0.936	2.46	2.62	21	24	9	1	92%	1
4Y28_CLA_B_1012	57%	7%	0.149	0.926	2.36	2.42	22	25	5	1	100%	1
4Y28_CLA_A_1022	57%	7%	0.144	0.92	2.39	2.41	20	27	5	1	100%	1
4Y28_CLA_A_1130	56%	4%	0.129	0.945	2.69	2.74	23	24	2	0	77%	1
4Y28_CLA_B_1222	56%	6%	0.154	0.929	2.34	2.53	22	27	11	1	100%	1
4Y28_CLA_2_2009	56%	5%	0.115	0.929	2.58	2.78	20	24	20	1	77%	1
4Y28_CLA_A_1137	56%	5%	0.134	0.935	2.56	2.6	23	25	4	1	85%	1
4Y28_CLA_B_1236	56%	5%	0.136	0.937	2.56	2.69	21	24	6	1	85%	1
4Y28_CLA_A_1126	56%	6%	0.155	0.929	2.38	2.49	22	27	10	1	100%	1
4Y28_CLA_B_1021	56%	6%	0.15	0.923	2.35	2.51	21	25	9	1	100%	1
4Y28_CLA_2_2007	56%	6%	0.147	0.933	2.37	2.55	21	25	30	1	92%	1
4Y28_CLA_B_1234	55%	5%	0.148	0.934	2.47	2.6	22	26	7	1	92%	1
4Y28_CLA_B_1204	55%	5%	0.121	0.918	2.58	2.63	22	24	11	1	85%	1
4Y28_CLA_A_1123	55%	6%	0.163	0.935	2.37	2.48	22	25	7	1	100%	1
4Y28_CLA_A_1112	55%	6%	0.152	0.922	2.36	2.47	22	25	15	1	100%	1
4Y28_CLA_2_2005	55%	5%	0.129	0.924	2.49	2.6	20	25	30	1	85%	1
4Y28_CLA_B_1220	54%	7%	0.151	0.918	2.37	2.39	22	25	12	0	100%	1
4Y28_CLA_A_1131	54%	7%	0.163	0.931	2.37	2.44	22	24	1	1	100%	1
4Y28_CLA_3_3003	54%	6%	0.143	0.922	2.36	2.62	20	27	69	1	92%	1
4Y28_CLA_2_2001	54%	6%	0.156	0.936	2.31	2.68	20	29	44	1	92%	1
4Y28_CLA_2_2012	54%	5%	0.134	0.926	2.41	2.73	19	27	25	1	85%	1
4Y28_CLA_A_1133	54%	5%	0.137	0.929	2.56	2.64	21	24	3	0	85%	1
4Y28_CLA_3_3005	53%	5%	0.144	0.936	2.47	2.75	19	28	18	1	85%	1
4Y28_CLA_4_4017	52%	7%	0.157	0.918	2.24	2.5	19	28	12	1	100%	1
4Y28_CLA_A_1110	52%	5%	0.154	0.943	2.58	2.58	21	24	13	1	85%	1
4Y28_CLA_A_1120	52%	6%	0.139	0.912	2.45	2.58	22	23	4	1	92%	1
4Y28_CLA_B_1238	52%	7%	0.15	0.908	2.38	2.44	23	23	7	1	100%	1
4Y28_CLA_A_1124	51%	5%	0.136	0.92	2.57	2.72	22	25	4	1	85%	1
4Y28_CLA_A_1105	51%	4%	0.122	0.916	2.68	2.74	21	28	6	1	78%	1
4Y28_CLA_A_1135	51%	4%	0.136	0.931	2.65	2.77	22	24	3	1	78%	1
4Y28_CLA_B_1208	51%	5%	0.126	0.908	2.58	2.67	22	24	9	1	85%	1
4Y28_CLA_B_1214	51%	5%	0.157	0.93	2.48	2.62	22	25	6	1	91%	1
4Y28_CLA_2_2002	51%	4%	0.117	0.923	2.66	2.85	19	25	49	1	71%	1
4Y28_CLA_3_3004	51%	6%	0.154	0.923	2.35	2.56	19	25	21	1	92%	1
4Y28_CLA_1_1005	51%	5%	0.128	0.908	2.41	2.74	19	28	23	1	85%	1
4Y28_CLA_3_3012	51%	4%	0.126	0.92	2.52	2.94	19	27	36	1	77%	1
4Y28_CLA_A_1118	50%	4%	0.129	0.932	2.82	2.77	21	22	3	1	71%	1
4Y28_CLA_3_3001	50%	4%	0.112	0.902	2.56	2.85	20	24	22	1	77%	1
4Y28_CLA_A_1108	49%	4%	0.123	0.924	2.86	2.71	22	22	2	1	71%	1
4Y28_CLA_B_1232	49%	5%	0.121	0.896	2.57	2.61	23	23	4	1	85%	1
4Y28_CLA_1_1007	49%	4%	0.124	0.925	2.66	3	19	25	7	1	71%	1
4Y28_CLA_A_1121	49%	5%	0.13	0.903	2.56	2.71	22	26	5	1	85%	1
4Y28_CLA_F_1301	48%	4%	0.119	0.919	2.63	2.76	19	21	8	1	69%	1
4Y28_CLA_B_1209	48%	4%	0.128	0.925	2.86	2.71	22	20	4	1	71%	1
4Y28_CLA_B_1213	47%	6%	0.146	0.901	2.45	2.53	21	23	8	0	92%	1
4Y28_CLA_B_1228	47%	6%	0.155	0.909	2.46	2.52	22	23	3	1	92%	1
4Y28_CLA_B_1212	47%	5%	0.157	0.925	2.54	2.68	21	26	5	1	85%	1
4Y28_CLA_L_1503	47%	5%	0.122	0.901	2.57	2.78	19	24	11	1	77%	1
4Y28_CLA_B_1219	46%	6%	0.16	0.909	2.47	2.47	23	23	2	1	92%	1
4Y28_CLA_G_1002	45%	4%	0.107	0.891	2.74	2.82	21	24	25	1	71%	1
4Y28_CLA_4_4007	45%	6%	0.168	0.916	2.28	2.73	19	25	33	1	92%	1
4Y28_CLA_B_1201	45%	4%	0.138	0.911	2.67	2.71	23	26	2	1	77%	1
4Y28_CLA_4_4002	44%	5%	0.147	0.918	2.55	2.79	18	27	17	1	77%	1
4Y28_CLA_3_3017	42%	4%	0.141	0.914	2.74	2.7	18	23	17	1	71%	1
4Y28_CLA_1_1014	41%	4%	0.118	0.884	2.7	2.9	19	25	15	1	71%	1
4Y28_CLA_4_4001	41%	6%	0.171	0.901	2.32	2.65	19	28	29	1	92%	1
4Y28_CLA_B_1218	41%	6%	0.169	0.884	2.37	2.51	21	24	13	1	100%	1
4Y28_CLA_B_1217	40%	4%	0.143	0.908	2.84	2.71	22	23	1	1	71%	1
4Y28_CLA_G_1001	39%	5%	0.136	0.871	2.44	2.76	19	29	43	1	85%	1
4Y28_CLA_1_1002	39%	4%	0.146	0.907	2.64	2.9	19	24	22	1	71%	1
4Y28_CLA_3_3006	35%	4%	0.117	0.845	2.56	2.86	20	25	45	1	77%	1
4Y28_CLA_4_4008	34%	3%	0.142	0.88	2.61	3.14	20	28	22	1	71%	1
4Y28_CLA_A_1114	34%	4%	0.121	0.856	2.85	2.71	21	23	2	1	71%	1
4Y28_CLA_2_2006	33%	5%	0.154	0.864	2.49	2.66	20	25	27	1	85%	1
4Y28_CLA_1_1006	33%	4%	0.14	0.862	2.59	2.82	21	26	7	1	77%	1
4Y28_CLA_A_1151	33%	4%	0.127	0.846	2.72	2.73	23	22	3	1	77%	1
4Y28_CLA_1_1011	33%	4%	0.166	0.888	2.54	2.82	20	27	19	1	77%	1
4Y28_CLA_A_1134	32%	5%	0.16	0.864	2.57	2.64	21	24	3	1	85%	1
4Y28_CLA_A_1115	30%	4%	0.155	0.874	2.85	2.68	22	21	1	1	71%	1
4Y28_CLA_3_3002	29%	4%	0.153	0.868	2.7	2.89	21	26	14	1	71%	1
4Y28_CLA_L_1501	28%	4%	0.153	0.849	2.59	2.79	18	28	17	1	77%	1
4Y28_CLA_4_4006	28%	5%	0.162	0.857	2.5	2.68	19	24	21	1	77%	1
4Y28_CLA_1_1001	27%	6%	0.167	0.831	2.32	2.64	19	24	52	1	92%	1
4Y28_CLA_A_1113	26%	4%	0.156	0.851	2.84	2.72	22	23	3	1	71%	1
4Y28_CLA_G_1003	25%	6%	0.159	0.811	2.37	2.62	20	27	39	1	92%	1
4Y28_CLA_1_1008	24%	4%	0.171	0.86	2.67	2.83	19	25	42	1	71%	1
4Y28_CLA_H_1000	22%	4%	0.145	0.818	2.84	2.72	21	22	5	1	71%	1
4Y28_CLA_3_3013	18%	5%	0.157	0.8	2.77	2.55	19	22	26	1	71%	1
4Y28_CLA_3_3018	17%	4%	0.158	0.783	2.56	2.9	21	27	25	1	77%	1
4Y28_CLA_1_1013	17%	4%	0.169	0.804	2.75	2.85	21	21	14	1	71%	1
4Y28_CLA_K_1001	16%	4%	0.157	0.784	2.73	2.99	20	23	18	1	71%	1
4Y28_CLA_3_3007	15%	5%	0.178	0.789	2.57	2.78	20	26	5	1	77%	1
4Y28_CLA_2_2016	11%	3%	0.19	0.755	2.62	3.36	19	30	54	1	77%	1
4Y28_CLA_3_3008	8%	3%	0.167	0.688	2.51	3.25	19	27	27	1	74%	1
4Y28_CLA_4_4016	6%	4%	0.177	0.682	2.74	2.8	20	24	32	1	71%	1
4Y28_CLA_3_3010	6%	6%	0.263	0.725	2.34	2.61	19	24	47	1	92%	1
4Y28_CLA_2_2019	6%	2%	0.168	0.707	3.31	3.03	16	16	0	1	42%	0.99
4Y28_CLA_J_1302	5%	4%	0.204	0.655	2.7	2.8	22	25	7	1	77%	1
4Y28_CLA_3_3019	0%	2%	0.273	0.446	3.45	3.01	16	15	1	1	42%	0.99
7DKZ_CLA_B_828	99%	30%	0.041	0.993	1.23	1.44	8	13	2	1	100%	1
2O01_CLA_B_1209	92%	5%	0.056	0.981	2.35	2.8	16	26	50	2	85%	1
4XK8_CLA_b_803	91%	8%	0.072	0.963	2.05	2.47	20	30	8	1	100%	1
5L8R_CLA_A_839	90%	24%	0.078	0.969	1.35	1.64	6	12	7	1	100%	1
6ZXS_CLA_B_807	83%	21%	0.1	0.963	1.35	1.83	7	16	6	1	100%	1
7M76_CLA_B_3041	100%	32%	0.015	0.999	1.25	1.37	7	8	4	1	100%	1
8OW6_CLA_A_601	100%	33%	0.017	0.998	1.21	1.35	8	7	0	1	100%	1
6PGK_CLA_G_842	100%	9%	0.024	0.997	2.21	2.22	21	25	9	1	100%	1
6JLO_CLA_B_606	100%	7%	0.037	0.993	2.02	2.71	20	31	6	1	100%	1
8OV5_CLA_O_601	99%	39%	0.038	0.989	1.13	1.17	4	2	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 4Y28 | pdb_00004y28

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4Y28 designated by the RCSB

4Y28 | pdb_00004y28