4GDI | pdb_00004gdi


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4GDI designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4GDI_NAG_D_504 33% 47% 0.183 0.8640.54 1.39 - 100100%1
4GDI_NAG_E_505 26% 57% 0.204 0.850.63 0.86 - -10100%1
4GDI_NAG_F_505 24% 59% 0.217 0.8530.58 0.85 - 100100%1
4GDI_NAG_B_507 21% 55% 0.219 0.8380.64 0.96 - -00100%1
4GDI_NAG_A_507 14% 51% 0.255 0.8150.42 1.31 - 300100%1
4GDI_NAG_A_508 6% 54% 0.27 0.730.57 1.04 - 100100%1
4GDI_NAG_B_508 6% 60% 0.321 0.7690.54 0.84 - -00100%1
4GDI_NAG_C_505 6% 59% 0.287 0.7310.57 0.85 - -00100%1
4GDI_NAG_A_506 5% 54% 0.294 0.7320.52 1.1 - 100100%1
4GDI_NAG_C_506 5% 50% 0.306 0.740.66 1.15 - 100100%1
4GDI_NAG_E_508 4% 47% 0.295 0.6790.68 1.23 - 200100%1
4GDI_NAG_F_506 3% 58% 0.361 0.7390.52 0.92 - 100100%1
4GDI_NAG_D_505 3% 51% 0.334 0.6830.59 1.18 - 200100%1
4GEZ_NAG_C_502 100% 54% 0.027 0.9880.6 1.03 - 110100%1
4FVK_NAG_B_505 46% 47% 0.17 0.9060.36 1.55 - 500100%1
4GDJ_NAG_A_506 19% 65% 0.21 0.8090.46 0.73 - -00100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.55 0.64 - -30100%1
3H0C_NAG_A_796 100% 55% 0.02 0.9950.47 1.12 - 100100%1
5O5D_NAG_B_501 100% 60% 0.02 0.9950.38 0.97 - 100100%1
9OAR_NAG_C_202 100% 52% 0.021 0.9940.68 1.06 - 100100%1
6MUG_NAG_G_629 100% 72% 0.022 0.9940.35 0.58 - -00100%1