Ligand validation:4GDI

GOL: GLYCEROL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4GDI_GOL_A_510	75%	81%	0.117	0.956	0.31	0.44	-	-	0	0	100%	1
4GDI_GOL_F_514	70%	86%	0.11	0.93	0.34	0.31	-	-	0	0	100%	1
4GDI_GOL_C_509	69%	76%	0.133	0.951	0.34	0.5	-	-	0	0	100%	1
4GDI_GOL_A_511	64%	87%	0.157	0.96	0.45	0.2	-	-	1	0	100%	1
4GDI_GOL_F_513	61%	77%	0.124	0.915	0.34	0.48	-	-	0	0	100%	1
4GDI_GOL_E_512	56%	84%	0.148	0.921	0.47	0.25	-	-	0	0	100%	1
4GDI_GOL_F_515	45%	77%	0.16	0.891	0.34	0.49	-	-	0	0	100%	1
4GDI_GOL_A_512	36%	88%	0.23	0.929	0.43	0.18	-	-	1	0	100%	1
4GDI_GOL_B_512	33%	88%	0.177	0.859	0.31	0.3	-	-	0	0	100%	1
4GDI_GOL_E_513	27%	88%	0.162	0.812	0.35	0.26	-	-	0	0	100%	1
4GDI_GOL_F_512	23%	66%	0.246	0.881	0.54	0.6	-	-	0	0	100%	1
4GDI_GOL_D_508	14%	82%	0.204	0.763	0.37	0.37	-	-	1	0	100%	1
4GDI_GOL_E_511	5%	81%	0.259	0.67	0.33	0.43	-	-	1	0	100%	1
4GDI_GOL_B_511	2%	84%	0.223	0.536	0.31	0.4	-	-	0	0	100%	1
5MR6_GOL_B_602	100%	63%	0.013	0.999	0.38	0.88	-	-	0	0	100%	1
23OM_GOL_A_303	100%	52%	0.017	0.997	0.7	1.01	-	-	0	0	100%	1
2NT0_GOL_D_506	100%	69%	0.016	0.997	0.3	0.72	-	-	0	0	100%	1
9O0J_GOL_G_302	100%	76%	0.015	0.997	0.4	0.46	-	-	0	0	100%	1
2YOQ_GOL_B_1196	100%	68%	0.019	0.996	0.68	0.42	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.