GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3BBF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3BBF_GDP_A_160 | 95% | 30% | 0.056 | 0.967 | 1.19 | 1.51 | 3 | 7 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_C_160 | 95% | 24% | 0.059 | 0.969 | 1.38 | 1.6 | 4 | 9 | 1 | 0 | 100% | 1 |
| 3BBF_GDP_D_160 | 89% | 27% | 0.068 | 0.953 | 1.18 | 1.66 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_B_160 | 86% | 23% | 0.072 | 0.946 | 1.24 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_F_160 | 80% | 24% | 0.08 | 0.931 | 1.28 | 1.69 | 5 | 8 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_E_160 | 48% | 24% | 0.115 | 0.855 | 1.32 | 1.7 | 4 | 8 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
