GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3BBF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3BBF_GDP_C_160 | 93% | 41% | 0.075 | 0.97 | 0.97 | 1.33 | 1 | 4 | 1 | 0 | 100% | 1 |
| 3BBF_GDP_A_160 | 88% | 51% | 0.085 | 0.962 | 0.96 | 0.93 | 1 | 1 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_D_160 | 86% | 48% | 0.08 | 0.947 | 0.92 | 1.09 | - | 2 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_B_160 | 82% | 41% | 0.095 | 0.949 | 0.89 | 1.41 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_F_160 | 79% | 47% | 0.097 | 0.941 | 0.86 | 1.19 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3BBF_GDP_E_160 | 44% | 45% | 0.129 | 0.853 | 0.99 | 1.12 | 1 | 2 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
