GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3SYN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3SYN_GDP_C_3 | 81% | 36% | 0.136 | 0.988 | 1.08 | 1.42 | 2 | 5 | 1 | 0 | 100% | 1 |
| 3SYN_GDP_A_1 | 80% | 44% | 0.139 | 0.989 | 1.01 | 1.16 | 2 | 4 | 0 | 0 | 100% | 1 |
| 3SYN_GDP_B_2 | 78% | 43% | 0.149 | 0.992 | 0.92 | 1.29 | 1 | 6 | 0 | 0 | 100% | 1 |
| 3SYN_GDP_D_4 | 73% | 42% | 0.159 | 0.987 | 0.96 | 1.29 | 1 | 6 | 2 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
