D5M: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
D5M is a Ligand Of Interest in 3KIE designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3KIE_D5M_T_999 | 20% | 46% | 0.29 | 0.893 | 0.93 | 1.15 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_E_999 | 19% | 46% | 0.273 | 0.868 | 0.93 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_O_999 | 13% | 46% | 0.311 | 0.849 | 0.92 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_M_999 | 12% | 46% | 0.297 | 0.83 | 0.93 | 1.15 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_Q_999 | 11% | 46% | 0.29 | 0.803 | 0.92 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_I_999 | 10% | 46% | 0.296 | 0.802 | 0.92 | 1.16 | 1 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_N_999 | 8% | 45% | 0.334 | 0.805 | 0.94 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_H_999 | 8% | 46% | 0.34 | 0.81 | 0.92 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_A_999 | 8% | 46% | 0.294 | 0.762 | 0.93 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_C_999 | 6% | 46% | 0.4 | 0.838 | 0.92 | 1.17 | 1 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_J_999 | 6% | 46% | 0.373 | 0.8 | 0.93 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_B_999 | 5% | 46% | 0.381 | 0.799 | 0.92 | 1.16 | 1 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_K_999 | 5% | 46% | 0.383 | 0.8 | 0.92 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_F_999 | 5% | 46% | 0.372 | 0.779 | 0.92 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_P_999 | 5% | 46% | 0.339 | 0.734 | 0.92 | 1.15 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_R_999 | 4% | 46% | 0.399 | 0.794 | 0.93 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_D_999 | 4% | 46% | 0.391 | 0.753 | 0.93 | 1.15 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_L_999 | 2% | 46% | 0.401 | 0.712 | 0.92 | 1.15 | 1 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_G_999 | 2% | 46% | 0.419 | 0.718 | 0.93 | 1.15 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIE_D5M_S_999 | 1% | 46% | 0.48 | 0.703 | 0.92 | 1.16 | 2 | 2 | 3 | 0 | 100% | 0.73 |
| 3KIC_D5M_J_999 | 51% | 42% | 0.191 | 0.945 | 0.92 | 1.3 | 1 | 3 | 1 | 0 | 100% | 0.7 |
| 4IOV_D5M_A_801 | 99% | 54% | 0.06 | 0.992 | 0.67 | 1.1 | - | 3 | 4 | 0 | 100% | 0.7 |
| 6B42_D5M_A_201 | 98% | 52% | 0.066 | 0.986 | 0.82 | 1.04 | 1 | 2 | 0 | 0 | 100% | 1 |
| 8HCG_D5M_A_306 | 95% | 32% | 0.078 | 0.982 | 1.69 | 1.02 | 7 | 1 | 0 | 0 | 100% | 1 |
| 8PUU_D5M_B_301 | 92% | 4% | 0.076 | 0.968 | 4.14 | 1.46 | 8 | 2 | 0 | 0 | 100% | 1 |
| 6JNL_D5M_C_101 | 89% | 60% | 0.09 | 0.977 | 0.72 | 0.82 | - | 1 | 0 | 0 | 95% | 1 |














