UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE
UPG is a Ligand Of Interest in 3KHU designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3KHU_UPG_C_501 | 93% | 23% | 0.045 | 0.982 | 1.28 | 1.88 | 3 | 12 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_D_501 | 91% | 33% | 0.049 | 0.978 | 1.02 | 1.6 | 1 | 9 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_E_501 | 87% | 26% | 0.057 | 0.976 | 1.51 | 1.5 | 5 | 7 | 2 | 0 | 100% | 1 |
| 3KHU_UPG_A_501 | 87% | 31% | 0.055 | 0.971 | 1.04 | 1.68 | 2 | 9 | 2 | 0 | 100% | 1 |
| 3KHU_UPG_B_501 | 86% | 27% | 0.057 | 0.972 | 1.36 | 1.61 | 3 | 10 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_F_501 | 82% | 15% | 0.062 | 0.963 | 2.14 | 1.57 | 12 | 7 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_E_502 | 66% | 32% | 0.085 | 0.937 | 1.23 | 1.46 | 5 | 8 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_A_502 | 58% | 26% | 0.101 | 0.927 | 1.17 | 1.85 | 4 | 10 | 1 | 0 | 100% | 1 |
| 3KHU_UPG_B_502 | 58% | 33% | 0.099 | 0.921 | 1.1 | 1.54 | 1 | 5 | 3 | 0 | 100% | 1 |
| 3KHU_UPG_C_502 | 49% | 17% | 0.113 | 0.903 | 1.39 | 2.14 | 3 | 16 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_D_502 | 44% | 25% | 0.125 | 0.894 | 1.57 | 1.51 | 6 | 7 | 1 | 0 | 100% | 1 |
| 3KHU_UPG_F_502 | 40% | 18% | 0.128 | 0.88 | 1.34 | 2.07 | 6 | 16 | 2 | 0 | 100% | 1 |
| 4EDF_UPG_B_501 | 99% | 34% | 0.023 | 0.995 | 1.16 | 1.4 | 4 | 6 | 0 | 0 | 100% | 1 |
| 2Q3E_UPG_A_501 | 89% | 40% | 0.054 | 0.979 | 1.04 | 1.24 | 1 | 9 | 2 | 0 | 100% | 1 |
| 6C4J_UPG_A_502 | 86% | 34% | 0.057 | 0.972 | 1.22 | 1.37 | 2 | 5 | 1 | 0 | 100% | 1 |
| 6C5Z_UPG_F_501 | 85% | 35% | 0.059 | 0.971 | 1.2 | 1.35 | 2 | 6 | 2 | 0 | 100% | 1 |
| 6C5A_UPG_F_502 | 81% | 34% | 0.067 | 0.967 | 1.19 | 1.4 | 3 | 6 | 2 | 0 | 100% | 1 |
| 4Y6U_UPG_A_404 | 100% | 28% | 0.02 | 0.997 | 1.16 | 1.72 | 3 | 11 | 0 | 0 | 100% | 1 |
| 5HUV_UPG_B_501 | 100% | 7% | 0.022 | 0.997 | 2.91 | 1.99 | 11 | 11 | 2 | 0 | 100% | 1 |
| 4Y9X_UPG_A_404 | 99% | 37% | 0.024 | 0.997 | 0.98 | 1.42 | 2 | 6 | 1 | 0 | 100% | 1 |
| 6K8D_UPG_D_301 | 99% | 61% | 0.023 | 0.995 | 0.45 | 0.87 | - | 3 | 0 | 0 | 100% | 1 |
| 4HO8_UPG_C_300 | 99% | 35% | 0.026 | 0.993 | 0.93 | 1.59 | 1 | 9 | 4 | 0 | 100% | 1 |














