D12: DODECANE
D12 is a Ligand Of Interest in 2YNK designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2YNK_D12_A_1007 | 40% | 85% | 0.194 | 0.906 | 0.35 | 0.39 | - | - | 0 | 0 | 100% | 1 |
| 2YNK_D12_A_1003 | 25% | 89% | 0.221 | 0.859 | 0.37 | 0.28 | - | - | 1 | 0 | 100% | 1 |
| 2YNK_D12_A_1002 | 24% | 86% | 0.217 | 0.845 | 0.36 | 0.35 | - | - | 0 | 0 | 100% | 1 |
| 2YNK_D12_A_1004 | 21% | 88% | 0.25 | 0.861 | 0.45 | 0.22 | - | - | 0 | 0 | 100% | 1 |
| 2YNK_D12_A_1008 | 17% | 86% | 0.296 | 0.879 | 0.32 | 0.4 | - | - | 0 | 0 | 100% | 1 |
| 2YNK_D12_A_1006 | 17% | 86% | 0.269 | 0.851 | 0.35 | 0.36 | - | - | 0 | 0 | 100% | 1 |
| 2YNK_D12_A_1005 | 16% | 88% | 0.201 | 0.772 | 0.36 | 0.31 | - | - | 1 | 0 | 100% | 1 |
| 4Y9H_D12_A_305 | 69% | 83% | 0.094 | 0.909 | 0.26 | 0.52 | - | - | 0 | 0 | 100% | 1 |
| 3HAS_D12_A_401 | 69% | 0% | 0.096 | 0.91 | 3.48 | 6.45 | 6 | 5 | 0 | 0 | 100% | 1 |
| 4DX5_D12_A_1111 | 49% | 59% | 0.128 | 0.875 | 0.44 | 1.11 | - | - | 8 | 0 | 100% | 1 |
| 5MZQ_D12_C_401 | 42% | 70% | 0.186 | 0.908 | 0.33 | 0.78 | - | - | 1 | 0 | 100% | 1 |
| 3HAP_D12_A_403 | 41% | 0% | 0.12 | 0.834 | 3.27 | 6.35 | 6 | 4 | 0 | 0 | 100% | 1 |
