9K8N | pdb_00009k8n

Solution structure of a short zinc-dependent DNAzyme minGAA

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H NOESY	0.44 mM NA DNAzyme minGAA, 10 mM deuterated Tris-D11, 1 mM NA ZnCl2, 0.1 mM NA DSS	95% H2O/5% D2O	11 mM	7.0	1 atm	298	Bruker AVANCE III HD 900
2	2D 1H-1H TOCSY	0.44 mM NA DNAzyme minGAA, 10 mM deuterated Tris-D11, 1 mM NA ZnCl2, 0.1 mM NA DSS	95% H2O/5% D2O	11 mM	7.0	1 atm	298	Bruker AVANCE III HD 900
3	2D DQF-COSY	0.44 mM NA DNAzyme minGAA, 10 mM deuterated Tris-D11, 1 mM NA ZnCl2, 0.1 mM NA DSS	95% H2O/5% D2O	11 mM	7.0	1 atm	298	Bruker AVANCE III HD 900
4	2D 1H-13C HSQC	0.44 mM NA DNAzyme minGAA, 10 mM deuterated Tris-D11, 1 mM NA ZnCl2, 0.1 mM NA DSS	95% H2O/5% D2O	11 mM	7.0	1 atm	298	Bruker AVANCE III HD 900

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III HD	900

NMR Refinement
Method	Details	Software
simulated annealing		CNS

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CNS	1.3	Brunger, Adams, Clore, Gros, Nilges and Read
2	structure calculation	CNS	1.3	Brunger, Adams, Clore, Gros, Nilges and Read
3	chemical shift assignment	Felix		Accelrys Software Inc.
4	peak picking	Felix		Accelrys Software Inc.