8VG3

Formerly degenerate seventh zinc finger domain from transcription factor ZNF711 rehabilitated by experimental NMR structure

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H NOESY	2.4 mM Z711-7, 4.4 mM ZnSO4	90% H2O/10% D2O	0	6.2	1 atm	283	Bruker AVANCE 600
2	2D 1H-1H TOCSY	2.4 mM Z711-7, 4.4 mM ZnSO4	90% H2O/10% D2O	0	6.2	1 atm	283	Bruker AVANCE 600
3	2D 1H-15N sofast HMQC	2.4 mM Z711-7, 4.4 mM ZnSO4	90% H2O/10% D2O	0	6.2	1 atm	283	Bruker AVANCE 600
4	2D 1H-13C HSQC	2.4 mM Z711-7, 4.4 mM ZnSO4	100% D2O	0	6.2	1 atm	298	Bruker AVANCE 600
5	2D 1H-1H DQF-COSY	2.4 mM Z711-7, 4.4 mM ZnSO4	90% H2O/10% D2O	0	6.2	1 atm	283	Bruker AVANCE 600
6	2D 1H-1H TOCSY	2.4 mM Z711-7, 4.4 mM ZnSO4	100% D2O	0	6.2	1 atm	298	Bruker AVANCE 600
7	2D 1H-1H NOESY	2.4 mM Z711-7, 4.4 mM ZnSO4	100% D2O	0	6.2	1 atm	298	Bruker AVANCE 600
8	DOSY	2.4 mM Z711-7, 4.4 mM ZnSO4	100% D2O	0	6.2	1 atm	298	Varian INOVA 600
9	2D 1H-1H NOESY	2.4 mM Z711-7, 4.4 mM ZnSO4	90% H2O/10% D2O	0	6.2	1 atm	283	Bruker AVANCE NEO 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600
2	Varian	INOVA	600
3	Bruker	AVANCE NEO	800

NMR Refinement
Method	Details	Software
DGSA-distance geometry simulated annealing	NESG script prot_sa_refine.inp -> obtained from here: https://nesgwiki.chem.buffalo.edu/index.php/Structure_Refinement_Using_XPLOR-NIH	X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	CcpNmr Analysis		CCPN
2	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
3	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
4	peak picking	CcpNmr Analysis		CCPN

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.