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Structural basis of aggregate binding/recognition by the AAA+ disaggregase ClpG
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 0.8 mM [U-100% 13C; U-100% 15N] ClpG 95% H2O/5% D2O KCl 50mM mM 6.5 1 atm 298 Bruker AVANCE III 700 2 3D 1H-13C NOESY 0.8 mM [U-100% 13C; U-100% 15N] ClpG 95% H2O/5% D2O KCl 50mM mM 6.5 1 atm 298 Bruker AVANCE III 700 3 3D HNCACB 0.8 mM [U-100% 13C; U-100% 15N] ClpG 95% H2O/5% D2O KCl 50mM mM 6.5 1 atm 298 Bruker AVANCE III 700 4 3D CBCA(CO)NH 0.8 mM [U-100% 13C; U-100% 15N] ClpG 95% H2O/5% D2O KCl 50mM mM 6.5 1 atm 298 Bruker AVANCE III 700 5 3D HNCA 0.8 mM [U-100% 13C; U-100% 15N] ClpG 95% H2O/5% D2O KCl 50mM mM 6.5 1 atm 298 Bruker AVANCE III 700 6 3D HCCH-TOCSY 0.8 mM [U-100% 13C; U-100% 15N] ClpG 95% H2O/5% D2O KCl 50mM mM 6.5 1 atm 298 Bruker AVANCE III 700 7 3D HNCO 0.8 mM [U-100% 13C; U-100% 15N] ClpG 95% H2O/5% D2O KCl 50mM mM 6.5 1 atm 298 Bruker AVANCE III 700 8 3D H(CCO)NH 0.8 mM [U-100% 13C; U-100% 15N] ClpG 95% H2O/5% D2O KCl 50mM mM 6.5 1 atm 298 Bruker AVANCE III 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 700
NMR Refinement Method Details Software simulated annealing refinement in explicit water ARIA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment NMRView 5.0.4 Johnson, One Moon Scientific 2 structure calculation CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read 3 structure calculation ARIA 1.2 Linge, O'Donoghue and Nilges 4 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax