8HTA

Solution Structure of the C65A/C167A Mutant of Human Lipocalin-type Prostaglandin D Synthase


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 10 % [U-99% 2H] D2O90% H2O/10% D2O20 mM4.01 atm308Varian INOVA 600
23D CBCA(CO)NH20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 10 % [U-99% 2H] D2O90% H2O/10% D2O20 mM4.01 atm308Varian INOVA 600
33D HNCACB20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 10 % [U-99% 2H] D2O90% H2O/10% D2O20 mM4.01 atm308Varian INOVA 600
43D 1H-15N NOESY20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 10 % [U-99% 2H] D2O90% H2O/10% D2O20 mM4.01 atm308Varian INOVA 600
53D 1H-15N TOCSY20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 10 % [U-99% 2H] D2O90% H2O/10% D2O20 mM4.01 atm308Varian INOVA 600
62D 13C-1H (HB)CB(CGCD)HD20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 99.95 % [U-100% 2H] D2O99.95% D2O20 mM4.01 atm308Varian INOVA 600
123D HCCH-TOCSY20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 99.95 % [U-100% 2H] D2O99.95% D2O20 mM4.01 atm308Varian INOVA 600
113D 1H-13C NOESY aliphatic20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 99.95 % [U-100% 2H] D2O99.95% D2O20 mM4.01 atm308Varian INOVA 600
103D 1H-13C NOESY aromatic20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 99.95 % [U-100% 2H] D2O99.95% D2O20 mM4.01 atm308Varian INOVA 600
132D 1H-13C HSQC20 mM [U-2H] acetic acid, 500 mM [U-13C; U-15N] Prostaglandin-H2 D-isomerase, 99.95 % [U-100% 2H] D2O99.95% D2O20 mM4.01 atm308Varian INOVA 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number5000
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
5structure calculationCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
1chemical shift assignmentSparky3.115Goddard
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax