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A novel insecticidal protein from ferns IPD113_Cow.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 conditions F3, F8, H4, H5, H6 and H8 of the Index HTTM screen
Crystal Properties Matthews coefficient Solvent content 2.29 46.28
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.641 α = 97.92 b = 79.393 β = 104.95 c = 108.548 γ = 97.41
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 16M 2018-08-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX2 0.95372 Australian Synchrotron MX2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.98 47.8 96.4 0.997 7.3 3.5 138352
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.98 2.02 0.748
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.1 47.82 111372 5827 97.18 0.22148 0.2197 0.2237 0.25557 0.2602 RANDOM 32.053
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -5.96 -5.12 -27.31 -18.14 14.46 24.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.93 r_dihedral_angle_4_deg 14.048 r_dihedral_angle_3_deg 12.605 r_dihedral_angle_1_deg 6.142 r_long_range_B_refined 3.827 r_long_range_B_other 3.827 r_mcangle_it 1.409 r_mcangle_other 1.409 r_scangle_other 1.239 r_angle_refined_deg 1.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.93 r_dihedral_angle_4_deg 14.048 r_dihedral_angle_3_deg 12.605 r_dihedral_angle_1_deg 6.142 r_long_range_B_refined 3.827 r_long_range_B_other 3.827 r_mcangle_it 1.409 r_mcangle_other 1.409 r_scangle_other 1.239 r_angle_refined_deg 1.16 r_angle_other_deg 1.085 r_mcbond_it 0.811 r_mcbond_other 0.811 r_scbond_it 0.718 r_scbond_other 0.718 r_chiral_restr 0.039 r_gen_planes_refined 0.003 r_bond_refined_d 0.002 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 15480 Nucleic Acid Atoms Solvent Atoms 745 Heterogen Atoms 24
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling PHASER phasing