8CKS

Crystal structure of Human Serum Albumin in complex with FESAN


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP2811.4 M (NH4)2SO4, 1% v/v 1,1,1,3,3,3-hexafluoro-2-propanol
Crystal Properties
Matthews coefficientSolvent content
2.5451.6

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 94.668α = 90
b = 57.817β = 109.225
c = 129.361γ = 90
Symmetry
Space GroupI 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELRIGAKU HyPix-6000HE2022-05-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SEALED TUBERIGAKU PhotonJet-S1.54184

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.619.57199.60.1020.1080.0350.99813.69.72048548
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.62.721000.7930.8350.260.9332.610.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.619.5711988999496.60.2380.23440.313971.525
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.1673.367-6.3921.509
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg19.56
r_dihedral_angle_6_deg12.85
r_dihedral_angle_2_deg12.631
r_lrange_it11.296
r_lrange_other11.295
r_scangle_it8.369
r_scangle_other8.33
r_mcangle_it7.611
r_mcangle_other7.61
r_dihedral_angle_1_deg6.179
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg19.56
r_dihedral_angle_6_deg12.85
r_dihedral_angle_2_deg12.631
r_lrange_it11.296
r_lrange_other11.295
r_scangle_it8.369
r_scangle_other8.33
r_mcangle_it7.611
r_mcangle_other7.61
r_dihedral_angle_1_deg6.179
r_scbond_it5.302
r_scbond_other5.196
r_mcbond_it5.068
r_mcbond_other5.068
r_angle_refined_deg1.133
r_angle_other_deg0.4
r_xyhbond_nbd_refined0.319
r_nbd_refined0.24
r_nbd_other0.227
r_symmetry_nbd_other0.219
r_symmetry_xyhbond_nbd_refined0.219
r_nbtor_refined0.186
r_symmetry_nbd_refined0.179
r_symmetry_nbtor_other0.075
r_symmetry_xyhbond_nbd_other0.062
r_chiral_restr0.055
r_gen_planes_refined0.005
r_bond_refined_d0.004
r_bond_other_d0.003
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4652
Nucleic Acid Atoms
Solvent Atoms142
Heterogen Atoms135

Software

Software
Software NamePurpose
REFMACrefinement
CrysalisProdata reduction
Aimlessdata scaling
MOLREPphasing