8AXE

Small molecule stabilizer for ERalpha and 14-3-3 (1074210)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2770.095 M HEPES (pH 7.3), PEG400 (24% (v/v)), 0.19 M CaCl2 and 5% (v/v) Glycerol
Crystal Properties
Matthews coefficientSolvent content
2.6353.19

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 81.554α = 90
b = 112.167β = 90
c = 62.411γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER2 X 9M2021-05-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID30B0.96863ESRFID30B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.833.6494.850.97214.443.524645
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.8640.953

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT4JC31.833.6424256127794.720.189360.187890.217RANDOM22.496
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.7-0.65-1.06
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.529
r_dihedral_angle_4_deg16.63
r_dihedral_angle_3_deg11.861
r_long_range_B_refined7.414
r_long_range_B_other7.296
r_scangle_other5.309
r_dihedral_angle_1_deg5.034
r_mcangle_other3.535
r_mcangle_it3.534
r_scbond_it3.417
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.529
r_dihedral_angle_4_deg16.63
r_dihedral_angle_3_deg11.861
r_long_range_B_refined7.414
r_long_range_B_other7.296
r_scangle_other5.309
r_dihedral_angle_1_deg5.034
r_mcangle_other3.535
r_mcangle_it3.534
r_scbond_it3.417
r_scbond_other3.415
r_mcbond_it2.298
r_mcbond_other2.296
r_angle_refined_deg1.181
r_angle_other_deg1.134
r_chiral_restr0.071
r_bond_refined_d0.007
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1898
Nucleic Acid Atoms
Solvent Atoms207
Heterogen Atoms27

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
MOLREPphasing