7M1A

SusE-like protein BT2857


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP4.52910.1 M sodium acetate, pH 4.5, 6.0% w/v PEG3350, 5% v/v ethylene glycol, 0.2 M ammonium acetate
Crystal Properties
Matthews coefficientSolvent content
2.6453.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 59.3α = 90
b = 61.08β = 101.587
c = 61.76γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 S 6M2016-11-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCLSI BEAMLINE 08B1-10.97949CLSI08B1-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.4246.8799.50.0670.0430.99715.66.4810912
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.421.597.50.2310.140.9565.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONSADFREE R-VALUE1.4243.02181090381099.4810.1680.16690.19913.418
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.172-0.2290.425-0.146
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.42
r_dihedral_angle_3_deg11.332
r_mcbond_it8.828
r_dihedral_angle_4_deg8.263
r_mcangle_it7.992
r_scangle_it7.727
r_dihedral_angle_1_deg7.286
r_rigid_bond_restr6.429
r_lrange_it5.784
r_scbond_it3.052
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.42
r_dihedral_angle_3_deg11.332
r_mcbond_it8.828
r_dihedral_angle_4_deg8.263
r_mcangle_it7.992
r_scangle_it7.727
r_dihedral_angle_1_deg7.286
r_rigid_bond_restr6.429
r_lrange_it5.784
r_scbond_it3.052
r_angle_refined_deg2.246
r_symmetry_xyhbond_nbd_refined0.775
r_symmetry_nbd_refined0.545
r_nbtor_refined0.311
r_nbd_refined0.216
r_xyhbond_nbd_refined0.182
r_chiral_restr0.143
r_metal_ion_refined0.106
r_gen_planes_refined0.018
r_bond_refined_d0.017
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2846
Nucleic Acid Atoms
Solvent Atoms403
Heterogen Atoms34

Software

Software
Software NamePurpose
REFMACrefinement
autoPROCdata reduction
SCALAdata scaling
SOLVEphasing