7M1A | pdb_00007m1a

SusE-like protein BT2857

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	4.5	291	0.1 M sodium acetate, pH 4.5, 6.0% w/v PEG3350, 5% v/v ethylene glycol, 0.2 M ammonium acetate

Crystal Properties
Matthews coefficient	Solvent content
2.64	53.38

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 59.3	α = 90
b = 61.08	β = 101.587
c = 61.76	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS3 S 6M		2016-11-10	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	CLSI BEAMLINE 08B1-1	0.97949	CLSI	08B1-1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.42	46.87	99.5	0.067	0.043	0.997	15.6	6.4		81091		2

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.42	1.5	97.5		0.231	0.14	0.956		5.4

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	Mean Isotropic B
X-RAY DIFFRACTION	SAD	FREE R-VALUE	1.42	43.021	81090	3810	99.481	0.168	0.1669	0.16	0.199	0.19	13.418

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.172		-0.229	0.425		-0.146

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	32.42
r_dihedral_angle_3_deg	11.332
r_mcbond_it	8.828
r_dihedral_angle_4_deg	8.263
r_mcangle_it	7.992
r_scangle_it	7.727
r_dihedral_angle_1_deg	7.286
r_rigid_bond_restr	6.429
r_lrange_it	5.784
r_scbond_it	3.052
r_angle_refined_deg	2.246
r_symmetry_xyhbond_nbd_refined	0.775
r_symmetry_nbd_refined	0.545
r_nbtor_refined	0.311
r_nbd_refined	0.216
r_xyhbond_nbd_refined	0.182
r_chiral_restr	0.143
r_metal_ion_refined	0.106
r_gen_planes_refined	0.018
r_bond_refined_d	0.017

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	2846
Nucleic Acid Atoms
Solvent Atoms	403
Heterogen Atoms	34

Software

Software
Software Name	Purpose
REFMAC	refinement
autoPROC	data reduction
SCALA	data scaling
SOLVE	phasing