7BEV

NMR structure of an optimized version of the first TPR domain of the human SPAG1 protein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
22D 1H-13C HSQC aliphatic1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
32D 1H-13C HSQC aromatic1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
43D HNCO1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
93D HNCACB1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
83D HNCA1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
73D CBCA(CO)NH1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
63D HCCH-TOCSY1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
53D HCCH-COSY1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
102D NOESY1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
113D 1H-15N NOESY1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
123D 1H-13C NOESY1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
133D HNHA1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
143D HBHA(CO)NH1 mM [U-13C; U-15N] SPAG1-TPR190% H2O/10% D2O150 mM6.41 atm293Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest restraint energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCARAKeller and Wuthrich
2processingTopSpinBruker Biospin
3collectionTopSpinBruker Biospin
4structure calculationCYANAGuntert, Mumenthaler and Wuthrich
5refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman