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NMR structure of an optimized version of the first TPR domain of the human SPAG1 protein
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 2 2D 1H-13C HSQC aliphatic 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 3 2D 1H-13C HSQC aromatic 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 4 3D HNCO 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 9 3D HNCACB 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 8 3D HNCA 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 7 3D CBCA(CO)NH 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 6 3D HCCH-TOCSY 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 5 3D HCCH-COSY 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 10 2D NOESY 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 11 3D 1H-15N NOESY 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 12 3D 1H-13C NOESY 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 13 3D HNHA 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600 14 3D HBHA(CO)NH 1 mM [U-13C; U-15N] SPAG1-TPR1 90% H2O/10% D2O 150 mM 6.4 1 atm 293 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software molecular dynamics Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest restraint energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CARA Keller and Wuthrich 2 processing TopSpin Bruker Biospin 3 collection TopSpin Bruker Biospin 4 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 5 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman