7ZL6

Azosemide in complex with human Carbonic anhydrase II (hCA II)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP82931.5 M sodium citrate, 50 mM Tris pH 8.0
Crystal Properties
Matthews coefficientSolvent content
2.1241.86

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.64α = 90
b = 41.58β = 104.522
c = 72.2γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 6M2021-11-03MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONELETTRA BEAMLINE 11.2C0.971700ELETTRA11.2C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.3840.26591.80.0490.0530.99918.546.346185
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.381.420.6720.7440.7442.17

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTNONE4FIK1.38340.26546185223591.8630.1630.16140.184817.719
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.028-0.0030.0260.004
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.779
r_dihedral_angle_4_deg22.63
r_dihedral_angle_3_deg12.432
r_dihedral_angle_1_deg7.157
r_lrange_other5.011
r_lrange_it5.009
r_scangle_it4.128
r_scangle_other4.127
r_scbond_it2.78
r_scbond_other2.778
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.779
r_dihedral_angle_4_deg22.63
r_dihedral_angle_3_deg12.432
r_dihedral_angle_1_deg7.157
r_lrange_other5.011
r_lrange_it5.009
r_scangle_it4.128
r_scangle_other4.127
r_scbond_it2.78
r_scbond_other2.778
r_mcangle_other2.599
r_mcangle_it2.596
r_angle_refined_deg1.795
r_mcbond_it1.767
r_mcbond_other1.759
r_angle_other_deg1.451
r_nbd_refined0.234
r_symmetry_nbd_other0.191
r_nbd_other0.178
r_symmetry_nbd_refined0.177
r_nbtor_refined0.174
r_symmetry_xyhbond_nbd_refined0.151
r_xyhbond_nbd_refined0.124
r_metal_ion_refined0.107
r_chiral_restr0.093
r_symmetry_nbtor_other0.081
r_bond_refined_d0.012
r_gen_planes_refined0.011
r_symmetry_xyhbond_nbd_other0.003
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2053
Nucleic Acid Atoms
Solvent Atoms219
Heterogen Atoms24

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
REFMACphasing