7Y4N

Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
113C-separated NOESY1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
715N-sperated NOESY1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
122D 1H-15N HSQC1 mM [U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
143D HNCO1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
153D HNCACO1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
163D HNCA1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
173D HN(CO)CA1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
133D CBCA(CO)NH1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
183D CBCANH1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
193D CCCONH1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
203D H(CCO)NH1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
213D 1H-15N TOCSY1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
223D 1H-15N COSY1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
233D TROSY HNCO1 mM [U-100% 13C; U-100% 15N] the C-terminal SH3 domain of Drosophila90% H2O/10% D2O100 mM7.4AMBIENT atm298Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsOPALp
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingAzara2.8Boucher, W.
2chemical shift assignmentCcpNmr Analysis2.5.1CCPN
3structure calculationCYANA3.98Guntert, P., Mumenthaler, C., and Wuthrich, K.
4collectionTopSpin3.5 PL7Bruker Biospin
5refinementOPALpLuginbuhl, R., Guntert, P., Billeter, M., and Wuthrich, K.