7Y0I

Solution structures of ASH1L PHD domain in complex with H3K4me2 peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCACB50 mM sodium phosphate, 100 mM sodium chloride, 100 uM ZINC ION, 2.0 mM [U-100% 2H] DTT90% H2O/10% D2Onull7.21 atm298Bruker AVANCE NEO 600
23D HN(COCA)CB50 mM sodium phosphate, 100 mM sodium chloride, 100 uM ZINC ION, 2.0 mM [U-100% 2H] DTT90% H2O/10% D2Onull7.21 atm298Bruker AVANCE NEO 600
33D 1H-15N NOESY50 mM sodium phosphate, 100 mM sodium chloride, 100 uM ZINC ION, 2.0 mM [U-100% 2H] DTT90% H2O/10% D2Onull7.21 atm298Bruker AVANCE NEO 800
43D 1H-13C NOESY aliphatic50 mM sodium phosphate, 100 mM sodium chloride, 100 uM ZINC ION, 2.0 mM [U-100% 2H] DTT100% D2Onull7.21 atm298Bruker AVANCE NEO 800
53D 1H-13C NOESY aromatic50 mM sodium phosphate, 100 mM sodium chloride, 100 uM ZINC ION, 2.0 mM [U-100% 2H] DTT100% D2Onull7.21 atm298Bruker AVANCE NEO 800
63D 13C-edited 13C/15N-Filtered NOESY aliphatic50 mM sodium phosphate, 100 mM sodium chloride, 100 uM ZINC ION, 2.0 mM [U-100% 2H] DTT100% D2Onull7.21 atm298Bruker AVANCE NEO 800
73D 13C-edited 13C/15N-Filtered NOESY aromatic50 mM sodium phosphate, 100 mM sodium chloride, 100 uM ZINC ION, 2.0 mM [U-100% 2H] DTT100% D2Onull7.21 atm298Bruker AVANCE NEO 800
82D TOCSY50 mM sodium phosphate, 100 mM sodium chloride, 100 uM ZINC ION, 2.0 mM [U-100% 2H] DTT90% H2O/10% D2Onull7.21 atm298Bruker AVANCE NEO 800
92D ROESY50 mM sodium phosphate, 100 mM sodium chloride, 100 uM ZINC ION, 2.0 mM [U-100% 2H] DTT90% H2O/10% D2Onull7.21 atm298Bruker AVANCE NEO 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE NEO600
2BrukerAVANCE NEO800
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementARIALinge, O'Donoghue and Nilges
2structure calculationCNSBrunger, Adams, Clore, Gros, Nilges and Read
3chemical shift assignmentNMRViewJohnson, One Moon Scientific
4peak pickingNMRViewJohnson, One Moon Scientific
5collectionTopSpinBruker Biospin
7processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax