7VF1 | pdb_00007vf1

Solution structure of a duplex-quadruplex hybrid formed by d[G4C2] repeats

SOLUTION NMR

---

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H NOESY	1.3 mM WT14, 20 mM potassium phosphate, 70 mM potassium chloride	90% H2O/10% D2O	102 mM	7.0	1 atm	298	Bruker AVANCE II 600
7	2D 1H-13C HMBC	1.3 mM WT14, 20 mM potassium phosphate, 70 mM potassium chloride	90% H2O/10% D2O	102 mM	7.0	1 atm	298	Bruker AVANCE II 600
2	2D 1H-1H NOESY	1.3 mM WT14, 20 mM potassium phosphate, 70 mM potassium chloride	100% D2O	102 mM	7.0	1 atm	298	Bruker AVANCE II 600
3	2D 1H-1H COSY	1.3 mM WT14, 20 mM potassium phosphate, 70 mM potassium chloride	100% D2O	102 mM	7.0	1 atm	298	Bruker AVANCE II 600
4	2D 1H-1H TOCSY	1.3 mM WT14, 20 mM potassium phosphate, 70 mM potassium chloride	100% D2O	102 mM	7.0	1 atm	298	Bruker AVANCE II 600
5	2D 1H-13C HSQC aromatic	1.3 mM WT14, 20 mM potassium phosphate, 70 mM potassium chloride	100% D2O	102 mM	7.0	1 atm	298	Bruker AVANCE II 600
6	2D 1H-13C HSQC	1.3 mM WT14, 20 mM potassium phosphate, 70 mM potassium chloride	100% D2O	102 mM	7.0	1 atm	298	Bruker AVANCE II 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE II	600

NMR Refinement
Method	Details	Software
DGSA-distance geometry simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin		Bruker Biospin
2	peak picking	Sparky		Goddard
3	chemical shift assignment	Sparky		Goddard
4	data analysis	Sparky		Goddard
5	structure calculation	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
6	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore