7SGT

Domain III (EDIII) of the POWV E glycoprotein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC.5 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O70 mM6.21 atm298Bruker AVANCE III HD 600
23D 1H-15N NOESY.5 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O70 mM6.21 atm298Bruker AVANCE III HD 600
33D 1H-15N TOCSY.5 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O70 mM6.21 atm298Bruker AVANCE III HD 600
4HNHA.5 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O70 mM6.21 atm298Bruker AVANCE III HD 600
52D 1H-15N HSQC1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride95% H2O/5% D2O70 mM6.21 atm278Bruker AVANCE DMX 800
62D 1H-13C HSQC aliphatic1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride100% D2O70 mM6.21 atm278Bruker AVANCE DMX 800
73D 1H-13C NOESY1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride100% D2O70 mM6.21 atm278Bruker AVANCE III HD 700
83D 1H-13C NOESY aromatic1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride100% D2O70 mM6.21 atm278Bruker AVANCE DMX 800
1613C HSQC aro1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride100% D2O70 mM6.21 atm278Bruker AVANCE III HD 700
93D HNCO1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride95% H2O/5% D2O70 mM6.21 atm278Bruker AVANCE III HD 700
103D HN(CO)CA1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride95% H2O/5% D2O70 mM6.21 atm278Bruker AVANCE DMX 800
113D HNCA1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride95% H2O/5% D2O70 mM6.21 atm278Bruker AVANCE DMX 800
133D HN(COCA)CB1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride95% H2O/5% D2O70 mM6.21 atm278Bruker AVANCE DMX 800
12HN(CA)CB1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride95% H2O/5% D2O70 mM6.21 atm278Bruker AVANCE DMX 800
14HN(CO)NH TOCSY1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride95% H2O/5% D2O70 mM6.21 atm278Bruker AVANCE DMX 800
15HC(CO)NH TOCSY1 mM [U-15N] domain III (EDIII) of the POWV E glycoprotein, 20 mM sodium phosphate, 50 mM sodium chloride100% D2O70 mM6.21 atm278Bruker AVANCE DMX 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD600
2BrukerAVANCE DMX800
3BrukerAVANCE III HD700
NMR Refinement
MethodDetailsSoftware
simulated annealingUsed Xplor-NIH 3.2: Final refinement with the inclusion of specific waterX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingTopSpin3.6.3Bruker Biospin
2processingNMRPipe2.1Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3chemical shift assignmentCcpNmr Analysis2.4CCPN
4structure calculationARIA2.3Linge, O'Donoghue and Nilges
6structure calculationSideRhttps://www.ucl.ac.uk/hansen-lab/sider_dfh
8structure calculationX-PLOR NIH3.42Schwieters, Kuszewski, Tjandra and Clore
10peak pickingCcpNmr Analysis2CCPN