7SEK

Solution structure of the zinc finger domain of murine MetAP1, complexed with ZNG N-terminal peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
23D HNCACB2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
33D CBCA(CO)NH2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
43D HNCO2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
53D 1H-15N NOESY2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
63D HN(CA)CO2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
73D HBHA(CO)NH2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
113D H(CCO)NH2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
103D C(CO)NH2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
93D HCCH-TOCSY2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
83D HCCH-TOCSY2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
162D 1H-13C HSQC aliphatic2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
152D 1H-13C HSQC aromatic2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Varian VNMRS 800
142D hbCBcgcdHD2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
132D hbCBcgcdceHE2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
123d Har(CC-TOCSY-CGCBCACO)NH2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
192D 1H-13C HSQC CT2 mM [U-10% 13C; U-100% 15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
182D 1H-13C HSQC CT2 mM [U-10% 13C; U-100% 15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
172D 1H-15N HSQC long-range2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS90% H2O/10% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
213D 1H-13C NOESY aliphatic2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
203D 1H-13C NOESY aromatic2 mM [U-13C; U-15N] ZNG-Metap1 fusion, 150 mM sodium chloride, 10 mM sodium phosphate, 2 mM TCEP, 0.3 mM DSS100% D2O150 mM71 atm298.15Bruker AVANCE NEO 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE NEO600
2VarianVNMRS800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (medoid)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCYANA3.98.13Guntert P.
2chemical shift assignmentCARAKeller and Wuthrich
3collectionTopSpin4.0.9Bruker Biospin
4collectionVnmrJVarian
5data analysisNMRFAM-SPARKYNMRFAM
6processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7processinghmsISTHyberts, Wagner
8structure calculationCYANA3.98.13Guntert P.