7S3R
NMR Solution Structure of hGal(1-12)KK, a solubility-tagged truncation of the human neuropeptide galanin
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 1D 1H acquisition | 2 mM hGal(1-17)K, 4.14 mM D3 sodium acetate, 5.86 mM D4 acetic acid | 95% H2O/5% D2O | 4.14 mM sodium acetate, d3 mM | 4.6 | 1 atm | 298 | Bruker AVANCE II 600 |
2 | 2D 1H-1H COSY | 2 mM hGal(1-17)K, 4.14 mM D3 sodium acetate, 5.86 mM D4 acetic acid | 95% H2O/5% D2O | 4.14 mM sodium acetate, d3 mM | 4.6 | 1 atm | 298 | Bruker AVANCE II 600 |
3 | 2D 1H-1H TOCSY | 2 mM hGal(1-17)K, 4.14 mM D3 sodium acetate, 5.86 mM D4 acetic acid | 95% H2O/5% D2O | 4.14 mM sodium acetate, d3 mM | 4.6 | 1 atm | 298 | Bruker AVANCE II 600 |
4 | 2D 1H-1H ROESY | 2 mM hGal(1-17)K, 4.14 mM D3 sodium acetate, 5.86 mM D4 acetic acid | 95% H2O/5% D2O | 4.14 mM sodium acetate, d3 mM | 4.6 | 1 atm | 298 | Bruker AVANCE II 600 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE II | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 1000 |
Conformers Submitted Total Number | 25 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | Brunger A. T. et.al. | |
2 | structure calculation | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
3 | chemical shift assignment | MestreLab (Mnova / MestReNova / MestReC) | MestreLab (Mnova / MestReNova / MestReC) | |
4 | peak picking | MestreLab (Mnova / MestReNova / MestReC) | MestreLab (Mnova / MestReNova / MestReC) |