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NMR structure of Npl3 RRM12 bound to the AUCCAGUGGAA RNA
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 0.9 mM [U-15N] Npl3 RRM12 90% H2O/10% D2O 50 mM 6.9 0 Pa 313 Bruker AVANCE 900 2 3D 1H-13C NOESY aliphatic 0.9 mM [U-100% 13C; U-100% 15N] Npl3 RRM12 90% H2O/10% D2O 50 mM 6.9 0 Pa 313 Bruker AVANCE 900 3 3D 1H-13C NOESY aromatic 0.9 mM [U-100% 13C; U-100% 15N] Npl3 RRM12 90% H2O/10% D2O 50 mM 6.9 0 Pa 313 Bruker AVANCE 900 4 2D NOESY 0.9 mM [U-15N] Npl3 RRM12 90% H2O/10% D2O 50 mM 6.9 0 Pa 313 Bruker AVANCE III 700 5 2D NOESY F1F2f 0.9 mM [U-100% 13C; U-100% 15N] Npl3 RRM12 90% H2O/10% D2O 50 mM 6.9 0 Pa 313 Bruker AVANCE III 600 6 2D NOESY F2f 0.9 mM [U-100% 13C; U-100% 15N] Npl3 RRM12 90% H2O/10% D2O 50 mM 6.9 0 Pa 313 Bruker AVANCE III 600 7 3D HNCACB 0.9 mM [U-100% 13C; U-100% 15N] Npl3 RRM12 90% H2O/10% D2O 50 mM 6.9 0 Pa 313 Bruker AVANCE III 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900 2 Bruker AVANCE III 700 3 Bruker AVANCE III 600
NMR Refinement Method Details Software simulated annealing Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment Sparky Goddard 4 peak picking CYANA Guntert, Mumenthaler and Wuthrich