SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
23D 1H-15N NOESY0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
83D HNHA0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
32D 1H-13C HSQC0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
43D HN(CA)CO0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
53D HN(CO)CA0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
63D HNCO0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
73D HNCA0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
93D HNCACB0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
103D HN(COCA)CB0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
113D HBHA(CO)NH0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
143D 1H-13C NOESY aliphatic0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
153D HCCH-TOCSY0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
163D 1H-13C NOESY aromatic0.7 mM [U-99% 15N] SUD-C domain of SARS-CoV-2, 50 mM no sodium phosphate, 50 mM no sodium chloride, 2 mM no DTT, 2 mM no EDTA, 0.25 mM no DSS, 10 % no D2O90% H2O/10% D2O100 mM7.21 atm298Bruker Avance HD- III HD 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance HD- III HD700
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (minimized average structure)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin3.2Bruker Biospin
2processingTopSpin3.2Bruker Biospin
3peak pickingCARAKeller and Wuthrich
4chemical shift assignmentCARAKeller and Wuthrich
5structure calculationCYANAGuntert, Mumenthaler and Wuthrich
6refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman