7LQT

Solution NMR structure of the PNUTS amino-terminal Domain fused to Myc Homology Box 0


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE III 600
72D 1H-13C HSQC aliphatic20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE II 800
62D 1H-13C HSQC aromatic20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE II 800
23D HN(CO)CA20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE III 600
33D HNCA20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE III 600
43D CBCA(CO)NH20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE III 600
53D HNCO20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE III 600
103D HBHA(CO)NH20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE III 600
93D HNCACO20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE III 600
83D 1H-15N NOESY20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE II 800
123D 1H-13C NOESY aliphatic20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE II 800
113D 1H-13C NOESY aromatic20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE II 800
133D HCCH-TOCSY20 mM HEPES, 200 mM sodium chloride, 2 mM DTT, 5 % glycerol, 400 uM [U-100% 13C; U-100% 15N] labeled protein95% H2O/5% D2O200 mM6.91 atm303Bruker AVANCE II 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE II800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger A. T. et.al.
2structure calculationCYANA2.1Guntert, Mumenthaler and Wuthrich
3chemical shift assignmentFMCGUIA. Lemak & C.H. Arrowsmith
4peak pickingSparkyGoddard