7KUB

Au1 Domain of VEGF Readthrough Element


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY100 uM RNA (60-MER)90% H2O/10% D2O50 mM5.6ambient280Bruker Ascend800 800
22D 1H-1H NOESY100 uM RNA (60-MER)100% D2O50 mM5.6ambient311Bruker Ascend800 800
32D 1H-1H NOESY100 uM RNA (60-MER)100% D2O50 mM8.0ambient311Bruker Ascend800 800
42D 1H-1H NOESY100 uM RNA (60-MER)100% D2O50 mM8.0ambient311Bruker Ascend800 800
52D 1H-1H NOESY100 uM RNA (60-MER)100% D2O50 mM8.0ambient311Bruker Ascend800 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAscend800800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2chemical shift assignmentNMRViewJJohnson, Bruce
3structure calculationCYANAGuntert, Mumenthaler and Wuthrich
4refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore