7I1B | pdb_00007i1b

HIGH-RESOLUTION THREE-DIMENSIONAL STRUCTURE OF INTERLEUKIN-1 BETA IN SOLUTION BY THREE-AND FOUR-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY


SOLUTION NMR
NMR Refinement
MethodDetailsSoftware
THE STRUCTURES ARE BASED ON 2630 INTERPROTON DISTANCE RESTRAINTS DERIVED FROM NOE MEASUREMENTS; 114 HYDROGEN BONDING DISTANCE RESTRAINTS FOR 57 HYDROGEN-BONDS IDENTIFIED ON THE BASIS OF THE NOE AND AMIDE PROTON EXCHANGE DATA, AS WELL AS THE INITIAL STRUCTURE CALCULATIONS; 36 DISTANCE RESTRAINTS RELATING TO NH-H2O-CO BRIDGING HYDROGEN BONDS INVOLVING 7 BOUND WATER MOLECULES AND IDENTIFIED FROM ROE MEASUREMENTS; AND 152 PHI AND 115 PSI BACKBONE TORSION ANGLE RESTRAINTS AND 99 CHI SIDE CHAIN TORSION ANGLE RESTRAINTS DERIVED FROM COUPLING CONSTRAINTS AND NOE DATA. THE LATTER ARE OBTAINED USING THE CONFORMATIONAL GRID SEARCH PROGRAM "STEREOSEARCH" (M. NILGES, G. M. CLORE, AND A. M. GRONENBORN (1990) BIOPOLYMERS 29, 813-822). THE METHOD USED TO DETERMINE THE STRUCTURES IS THE HYBRID METRIC MATRIX DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING METHOD (M. NILGES, G. M. CLORE, AND A. M. GRONENBORN, (1990) FEBS LETT. 229, 317-324). THE QUANTITY PRESENTED IN THE B-VALUE FIELD IN THIS COORDINATE FILE REPRESENTS THE ATOMIC RMS DEVIATION OF THE INDIVIDUAL STRUCTURES ABOUT THE MEAN COORDINATE POSITIONS. THE RESTRAINED MINIMIZED AVERAGE STRUCTURE CAN BE FOUND IN PDB ENTRY 6I1B. IT WAS OBTAINED BY AVERAGING THE COORDINATES OF THE INDIVIDUAL STRUCTURES AND SUBJECTING THE RESULTING COORDINATES TO RESTRAINED MINIMIZATION.
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number32